tripsAndDipR: Identification of 2n and 3n Samples from Amplicon Sequencing Data

Uses read counts for biallelic single nucleotide polymorphisms (SNPs) to compare the likelihoods for the observed read counts given that a sample is either diploid or triploid. It allows parameters to be specified to account for sequencing error rates and allelic bias. For details of the algorithm, please see Delomas (2019) <doi:10.1111/1755-0998.13073>.

Version: 0.1.0
Imports: stats
Published: 2019-08-28
Author: Thomas Delomas [aut, cre]
Maintainer: Thomas Delomas <thomas.delomas at idfg.idaho.gov>
BugReports: https://github.com/delomast/tripsAndDipR/issues
License: MIT + file LICENSE
URL: https://github.com/delomast/tripsAndDipR
NeedsCompilation: no
CRAN checks: tripsAndDipR results

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Reference manual: tripsAndDipR.pdf
Package source: tripsAndDipR_0.1.0.tar.gz
Windows binaries: r-devel: tripsAndDipR_0.1.0.zip, r-release: tripsAndDipR_0.1.0.zip, r-oldrel: tripsAndDipR_0.1.0.zip
OS X binaries: r-release: tripsAndDipR_0.1.0.tgz, r-oldrel: tripsAndDipR_0.1.0.tgz

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