NeuriteBlast            Produce similarity score for neuron
                        morphologies
WeightedNNBasedLinesetMatching
                        Compute point & tangent vector similarity score
                        between two linesets
[                       Extract parts of a sparse 'spam' matrix
calc_dists_dotprods     Calculate distances and dot products between
                        two sets of neurons
calc_prob_mat           Calculate probability matrix from distances and
                        dot products between neuron segments
calc_score_matrix       Calculate scoring matrix from probability
                        matrices for matching and non-matching sets of
                        neurons
create_scoringmatrix    Create a scoring matrix given matching and
                        non-matching sets of neurons
diagonal                Extract diagonal terms from a variety of matrix
                        types
fctraces20              20 traced Drosophila neurons from Chiang et al
                        2011
fill_in_sparse_score_mat
                        Add one or more submatrices to a sparse score
                        matrix
fill_pairs_sparse_score_mat
                        Add forwards, reverse and self scores for a
                        pair of neurons to a sparse score matrix
nat.nblast-package      Neuron similarity, search and clustering tools
nblast                  Calculate similarity score for neuron
                        morphologies
nblast_allbyall         Wrapper function to compute all by all NBLAST
                        scores for a set of neurons
neuron_pairs            Utility function to generate all or random
                        pairs of neurons
nhclust                 Cluster a set of neurons
plot3d.hclust           Methods to identify and plot groups of neurons
                        cut from an 'hclust' object
show_similarity         Display two neurons with segments in the query
                        coloured by similarity
smat.fcwb               Scoring matrices for neuron similarities in
                        FCWB template brain
sparse_score_mat        Convert a subset of a square score matrix to a
                        sparse representation
sub_dist_mat            Convert (a subset of) a raw score matrix to a
                        distance matrix
sub_score_mat           Return scores (or distances) for given query
                        and target neurons
subset.hclust           Return the labels of items in 1 or more groups
                        cut from hclust object
