geiger: Analysis of Evolutionary Diversification

Methods for fitting macroevolutionary models to phylogenetic trees Pennell (2014) <doi:10.1093/bioinformatics/btu181>.

Version: 2.0.7
Depends: ape (≥ 3.0-6), R (≥ 2.15.0)
Imports: MASS, mvtnorm, subplex, deSolve (≥ 1.7), digest, Rcpp (≥ 0.11.0), coda, ncbit, colorspace, methods, phytools (≥ 0.7.31)
LinkingTo: Rcpp
Published: 2020-06-02
Author: Luke Harmon, Matthew Pennell, Chad Brock, Joseph Brown, Wendell Challenger, Jon Eastman, Rich FitzJohn, Rich Glor, Gene Hunt, Liam Revell, Graham Slater, Josef Uyeda, and Jason Weir
Maintainer: Luke Harmon <lukeh at uidaho.edu>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/mwpennell/geiger-v2
NeedsCompilation: yes
Citation: geiger citation info
Materials: README ChangeLog
In views: Phylogenetics
CRAN checks: geiger results

Downloads:

Reference manual: geiger.pdf
Package source: geiger_2.0.7.tar.gz
Windows binaries: r-devel: geiger_2.0.7.zip, r-release: geiger_2.0.7.zip, r-oldrel: geiger_2.0.6.4.zip
macOS binaries: r-release: geiger_2.0.7.tgz, r-oldrel: geiger_2.0.7.tgz
Old sources: geiger archive

Reverse dependencies:

Reverse depends: convevol, iteRates, OUwie, TreeSim, windex
Reverse imports: dispRity, evobiR, hilldiv, nichevol, ouxy, PhyInformR, phylocurve, pmc, Rarefy, ratematrix, RPANDA, Rphylopars, RRphylo, secsse, sensiPhy, treeplyr
Reverse suggests: BBMV, diversitree, fishtree, ouch, pcmabc, phytools, RNeXML

Linking:

Please use the canonical form https://CRAN.R-project.org/package=geiger to link to this page.