Mark-Recapture Analysis

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Documentation for package ‘mra’ version 2.16.11

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mra-package MRA - Mark Recapture Analysis
CJS F.cjs.estim - Cormack-Jolly-Seber estimation
cjs F.cjs.estim - Cormack-Jolly-Seber estimation
Cormack F.cjs.estim - Cormack-Jolly-Seber estimation
cr.estim F.cjs.estim - Cormack-Jolly-Seber estimation
dipper.data European Dipper data
dipper.histories European Dipper data
dipper.males European Dipper data
F.3d.model.matrix 3-Dimensional capture-recapture model matrices
F.cjs.covars F.cjs.covars
F.cjs.estim F.cjs.estim - Cormack-Jolly-Seber estimation
F.cjs.gof F.cjs.gof
F.cjs.simulate F.cjs.simulate - Generation of capture histories that follow a CJS model.
F.cr.model.avg F.cr.model.avg - Model averaging of mark-recapture parameters.
F.cr.model.matrix Capture-Recapture model matrix
F.fit.table F.fit.table - Produce a summary table of model fit statistics.
F.huggins.estim F.huggins.estim - Estimation of Huggins closed population capture-recapture model.
F.sat.lik F.sat.lik
F.step.cjs F.step.cjs - Stepwise model selection for CJS models.
F.update.df F.update.df - Update degrees of freedom in a Cormack-Jolly-Seber fitted object
Huggins F.huggins.estim - Estimation of Huggins closed population capture-recapture model.
huggins F.huggins.estim - Estimation of Huggins closed population capture-recapture model.
huggins.estim F.huggins.estim - Estimation of Huggins closed population capture-recapture model.
ivar Expand Individual-varying covariates in models
Jolly F.cjs.estim - Cormack-Jolly-Seber estimation
lines.cjs lines.cjs
mra MRA - Mark Recapture Analysis
mra.control mra.control - Control over MRA fitting process
plot.cjs Plot CJS Model
plot.nhat Plot size estimates
predict.cjs predict.cjs
print.cjs Print Cormack-Jolly-Seber (CJS) Models
print.hug Print Huggin's Model objects
print.nhat print.nhat
residuals.cjs Residuals for CJS Model
Seber F.cjs.estim - Cormack-Jolly-Seber estimation
tvar Expand Time-varying covariates in models