Order Restricted Clustering for Microarray Experiments

Documentation for package ‘ORCME’ version 2.0.2

doseData	Dose Data Example
geneData	Gene Expression Data Example
monotoneDirection	The monotone means under increasing/decreasing trend
ORCME	Order restricted clustering for dose-response trends in microarray experiments
plotCluster	Plotting the gene specific profiles for one given cluster of genes
plotIsomeans	Plot of the observed gene expression and the isotonic means with respect to dose
plotLambda	Plot the variaty of the properties dependent on the proportion of heterogeneity in observed data set
resampleORCME	Estimation of the proportion of the heterogeneity in the observed data for clustering