Last updated on 2025-10-15 01:49:54 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.87 | 254.26 | 268.13 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 9.12 | 241.68 | 250.80 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 318.39 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.65 | 265.06 | 280.71 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.76 | 265.07 | 279.83 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 188.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 189.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 181.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 235.00 | 258.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.496, system: 0.039, elapsed: 2.849 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.872, system: 0.063, elapsed: 14.353 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.723, system: 0.175, elapsed: 6.770 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.281 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.977, system: 0.313, elapsed: 25.473 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.477, system: 0.031, elapsed: 2.673 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.974, system: 0.090, elapsed: 15.041 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.349 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.672, system: 0.153, elapsed: 5.655 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.002, elapsed: 0.232 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.995, system: 0.307, elapsed: 24.848 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.516, system: 0.029, elapsed: 2.252 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.975, system: 0.087, elapsed: 15.174 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.380 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.717, system: 0.175, elapsed: 6.730 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.278 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.188, system: 0.213, elapsed: 1.278 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.356, system: 0.538, elapsed: 27.053 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.475, system: 0.033, elapsed: 2.460 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.989, system: 0.066, elapsed: 14.239 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.288 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.754, system: 0.174, elapsed: 6.141 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.007, elapsed: 0.289 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.161, system: 0.430, elapsed: 16.369 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.397, system: 0.747, elapsed: 40.929 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/123s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.506, system: 0.037, elapsed: 2.746 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.880, system: 0.063, elapsed: 14.298 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.013, elapsed: 0.298 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.519, system: 0.164, elapsed: 5.656 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.006, elapsed: 0.232 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.791, system: 0.306, elapsed: 24.067 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.529, system: 0.032, elapsed: 2.714 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.939, system: 0.078, elapsed: 15.081 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.179, system: 0.011, elapsed: 0.355 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.581, system: 0.155, elapsed: 6.035 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.004, elapsed: 0.282 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.917, system: 0.314, elapsed: 25.384 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.491, system: 0.027, elapsed: 2.171 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.833, system: 0.052, elapsed: 14.635 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.010, elapsed: 0.312 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.459, system: 0.161, elapsed: 5.429 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.009, elapsed: 0.246 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.026, system: 0.221, elapsed: 0.988 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.764, system: 0.506, elapsed: 24.714 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.460, system: 0.030, elapsed: 2.352 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.930, system: 0.082, elapsed: 14.994 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.012, elapsed: 0.289 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.589, system: 0.182, elapsed: 6.147 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.258 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.025, system: 0.470, elapsed: 15.863 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.964, system: 0.802, elapsed: 40.903 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64