Last updated on 2026-04-13 04:52:44 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.70 | 272.80 | 287.50 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.41 | 231.23 | 242.64 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 303.98 | 325.98 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 345.52 | 376.52 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 198.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 17.39 | 342.95 | 360.34 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.92 | 348.12 | 361.04 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 502.00 | 514.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 0.00 | 18.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 703.00 | 714.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 243.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/458s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.056, elapsed: 2.605 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.749, system: 0.202, elapsed: 16.245 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.021, elapsed: 0.958 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.218, system: 0.942, elapsed: 115.439 seconds]
Computing values for grid cells...
... done. [user: 0.196, system: 0.014, elapsed: 0.446 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.584, system: 1.353, elapsed: 136.785 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.736, system: 0.072, elapsed: 2.803 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.784, system: 0.192, elapsed: 18.482 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.019, elapsed: 1.077 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.209, system: 0.981, elapsed: 143.085 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.333 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.716, system: 1.364, elapsed: 166.926 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.599, system: 0.045, elapsed: 3.141 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.541, system: 0.094, elapsed: 15.148 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.318, system: 0.019, elapsed: 1.109 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.476, system: 0.859, elapsed: 47.603 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.301 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.368, system: 0.328, elapsed: 1.640 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 21.162, system: 1.390, elapsed: 70.066 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.603, system: 0.048, elapsed: 2.805 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.554, system: 0.117, elapsed: 14.064 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.018, elapsed: 1.073 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.649, system: 0.724, elapsed: 45.975 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.172 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.213, system: 0.611, elapsed: 12.113 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.166, system: 1.567, elapsed: 77.279 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/11m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.616, system: 0.046, elapsed: 3.461 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.655, system: 0.079, elapsed: 16.117 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.021, elapsed: 1.124 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.098, system: 0.895, elapsed: 134.219 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.007, elapsed: 0.395 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.335, system: 1.072, elapsed: 156.314 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.757, system: 0.077, elapsed: 4.313 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.924, system: 0.270, elapsed: 25.138 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.025, elapsed: 1.140 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.804, system: 1.204, elapsed: 95.020 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.008, elapsed: 0.424 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.489, system: 1.695, elapsed: 127.496 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.572, system: 0.043, elapsed: 3.507 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.855, system: 0.190, elapsed: 23.656 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.021, elapsed: 1.246 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.875, system: 0.915, elapsed: 103.163 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.005, elapsed: 0.187 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.314, system: 0.296, elapsed: 1.308 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.699, system: 1.521, elapsed: 134.634 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.701, system: 0.057, elapsed: 2.114 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.563, system: 0.072, elapsed: 14.886 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.017, elapsed: 1.163 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.814, system: 0.876, elapsed: 150.742 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.227 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.548, system: 0.674, elapsed: 46.900 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.714, system: 1.737, elapsed: 216.941 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64