CRAN Package Check Results for Package promor

Last updated on 2024-03-28 01:54:07 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.1 26.80 267.50 294.30 NOTE
r-devel-linux-x86_64-debian-gcc 0.2.1 21.17 196.54 217.71 NOTE
r-devel-linux-x86_64-fedora-clang 0.2.1 396.35 NOTE
r-devel-linux-x86_64-fedora-gcc 0.2.1 358.90 NOTE
r-devel-windows-x86_64 0.2.1 22.00 201.00 223.00 ERROR
r-patched-linux-x86_64 0.2.1 22.89 252.44 275.33 OK
r-release-linux-x86_64 0.2.1 24.47 256.21 280.68 OK
r-release-macos-arm64 0.2.1 99.00 OK
r-release-macos-x86_64 0.2.1 168.00 OK
r-release-windows-x86_64 0.2.1 29.00 260.00 289.00 OK
r-oldrel-macos-arm64 0.2.1 100.00 OK
r-oldrel-windows-x86_64 0.2.1 31.00 245.00 276.00 OK

Check Details

Version: 0.2.1
Check: Rd files
Result: NOTE checkRd: (-1) impute_plot.Rd:32: Lost braces; missing escapes or markup? 32 | \item{global}{Logical. If \code{TRUE} ({default}), a global density plot is | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 0.2.1
Check: tests
Result: ERROR Running 'testthat.R' [7s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(promor) > > test_check("promor") 0 empty row(s) removed. 2 empty column(s) removed. 1 protein(s) (rows) only identified by site removed. 4 protein(s) identified by 2 or fewer unique peptides removed. Zeros have been replaced with NAs. Data have been log-transformed. 4 proteins with higher than 33% NAs in at least one group removed. 0 empty row(s) removed. 4 empty column(s) removed. 10 protein contaminant(s) (rows) removed. 0 protein(s) identified by 2 or fewer unique peptides removed. Zeros have been replaced with NAs. Data have been log-transformed. missForest iteration 1 in progress...done! estimated error(s): 1.238942 difference(s): 0.01291771 time: 0.02 seconds missForest iteration 2 in progress...done! estimated error(s): 1.308915 difference(s): 0.002628932 time: 0 seconds missForest iteration 3 in progress...done! estimated error(s): 1.089121 difference(s): 0.006704341 time: 0.01 seconds change in estimate: 0.02415548 change in estimate: 0.02101209 change in estimate: 0.01821531 change in estimate: 0.0157772 change in estimate: 0.01367284 change in estimate: 0.01186459 change in estimate: 0.01031291 change in estimate: 0.008980791 1 siginificantly differentially expressed proteins found. Flavor: r-devel-windows-x86_64