Last updated on 2025-09-18 02:51:19 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.1 | 6.83 | 88.19 | 95.02 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.1.1 | 4.57 | 42.63 | 47.20 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.1.1 | 138.11 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.1 | 130.00 | OK | |||
| r-devel-windows-x86_64 | 2.1.1 | 8.00 | 255.00 | 263.00 | OK | |
| r-patched-linux-x86_64 | 2.1.1 | 5.73 | 80.66 | 86.39 | OK | |
| r-release-linux-x86_64 | 2.1.1 | 6.02 | 81.25 | 87.27 | OK | |
| r-release-macos-arm64 | 2.1.1 | 220.00 | OK | |||
| r-release-macos-x86_64 | 2.1.1 | 248.00 | OK | |||
| r-release-windows-x86_64 | 2.1.1 | 10.00 | 232.00 | 242.00 | OK | |
| r-oldrel-macos-arm64 | 2.1.1 | 198.00 | OK | |||
| r-oldrel-macos-x86_64 | 2.1.1 | 219.00 | OK | |||
| r-oldrel-windows-x86_64 | 2.1.1 | 10.00 | 239.00 | 249.00 | OK |
Version: 2.1.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [4s/185s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(rPDBapi)
>
> test_check("rPDBapi")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 66 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_find_results.R:3:3'): find_papers returns correct paper titles ──
Error in `value[[3L]](cond)`: Failed to fetch search results for term 'ribosome'. Error: All retrieval attempts failed after 1 tries. Please check the search term, query type, and your network connection.
Backtrace:
▆
1. └─rPDBapi::find_papers("ribosome", max_results = 2) at test_find_results.R:3:3
2. └─base::tryCatch(...)
3. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. └─value[[3L]](cond)
── Error ('test_find_results.R:12:3'): find_results returns correct field information ──
Error in `value[[3L]](cond)`: Failed to fetch search results for term 'crispr'. Error: All retrieval attempts failed after 1 tries. Please check the search term, query type, and your network connection.
Backtrace:
▆
1. └─rPDBapi::find_results("crispr", field = "citation") at test_find_results.R:12:3
2. └─base::tryCatch(...)
3. └─base (local) tryCatchList(expr, classes, parentenv, handlers)
4. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
5. └─value[[3L]](cond)
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 66 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc