CRAN Package Check Results for Package transfR

Last updated on 2025-02-05 02:49:04 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.11 7.50 85.84 93.34 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.11 5.06 65.72 70.78 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.11 155.07 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.11 156.88 ERROR
r-devel-windows-x86_64 1.0.11 12.00 119.00 131.00 ERROR
r-patched-linux-x86_64 1.0.11 7.62 83.39 91.01 NOTE
r-release-linux-x86_64 1.0.11 5.82 84.46 90.28 NOTE
r-release-macos-arm64 1.0.11 198.00 NOTE
r-release-macos-x86_64 1.0.11 323.00 NOTE
r-release-windows-x86_64 1.0.11 12.00 450.00 462.00 NOTE
r-oldrel-macos-arm64 1.0.11 198.00 OK
r-oldrel-macos-x86_64 1.0.11 504.00 OK
r-oldrel-windows-x86_64 1.0.11 13.00 413.00 426.00 OK

Check Details

Version: 1.0.11
Check: Rd files
Result: NOTE checkRd: (-1) Blavet.Rd:15: Lost braces in \itemize; meant \describe ? checkRd: (-1) Blavet.Rd:16: Lost braces in \itemize; meant \describe ? checkRd: (-1) Blavet.Rd:17: Lost braces in \itemize; meant \describe ? checkRd: (-1) Blavet.Rd:18: Lost braces in \itemize; meant \describe ? checkRd: (-1) Blavet.Rd:19: Lost braces in \itemize; meant \describe ? checkRd: (-1) Blavet.Rd:20: Lost braces in \itemize; meant \describe ? checkRd: (-1) Blavet.Rd:28: Lost braces in \itemize; meant \describe ? checkRd: (-1) Blavet.Rd:29: Lost braces in \itemize; meant \describe ? checkRd: (-1) Blavet.Rd:30: Lost braces in \itemize; meant \describe ? checkRd: (-1) Oudon.Rd:15: Lost braces in \itemize; meant \describe ? checkRd: (-1) Oudon.Rd:16: Lost braces in \itemize; meant \describe ? checkRd: (-1) Oudon.Rd:17: Lost braces in \itemize; meant \describe ? checkRd: (-1) Oudon.Rd:18: Lost braces in \itemize; meant \describe ? checkRd: (-1) Oudon.Rd:19: Lost braces in \itemize; meant \describe ? checkRd: (-1) Oudon.Rd:20: Lost braces in \itemize; meant \describe ? checkRd: (-1) Oudon.Rd:28: Lost braces in \itemize; meant \describe ? checkRd: (-1) Oudon.Rd:29: Lost braces in \itemize; meant \describe ? Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.0.11
Check: examples
Result: ERROR Running examples in ‘transfR-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: as_transfr > ### Title: Create transfR object > ### Aliases: as_transfr > > ### ** Examples > > data(Oudon) > object <- as_transfr(st = Oudon$obs, hl = Oudon$hl) Error in UseMethod("set_units") : no applicable method for 'set_units' applied to an object of class "difftime" Calls: as_transfr -> <Anonymous> Execution halted Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.0.11
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘V01_get_started.Rmd’ using rmarkdown Quitting from lines 36-40 [unnamed-chunk-2] (V01_get_started.Rmd) Error: processing vignette 'V01_get_started.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V01_get_started.Rmd’ --- re-building ‘V02_inputs_preparation_stars.Rmd’ using rmarkdown Quitting from lines 87-89 [unnamed-chunk-6] (V02_inputs_preparation_stars.Rmd) Error: processing vignette 'V02_inputs_preparation_stars.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V02_inputs_preparation_stars.Rmd’ --- re-building ‘V03_inputs_preparation_whitebox.Rmd’ using rmarkdown sh: 1: /home/hornik/tmp/scratch/check-CRAN-regular-hornik/data/R/whitebox/WBT/whitebox_tools: not found trying URL 'https://www.whiteboxgeo.com/WBT_Linux/WhiteboxTools_linux_amd64.zip' Content type 'application/zip' length 24581859 bytes (23.4 MB) ================================================== downloaded 23.4 MB ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/transfR.Rcheck/vign_test/transfR/vignettes/V03_inputs_preparation_whitebox_files/figure-html/unnamed-chunk-7-1.png 672x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 54033 bytes Input file size = 54183 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42174 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42174 Output IDAT size = 42174 bytes (11859 bytes decrease) Output file size = 42252 bytes (11931 bytes = 22.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/transfR.Rcheck/vign_test/transfR/vignettes/V03_inputs_preparation_whitebox_files/figure-html/unnamed-chunk-9-1.png 672x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 51790 bytes Input file size = 51940 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39926 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39926 Output IDAT size = 39926 bytes (11864 bytes decrease) Output file size = 40004 bytes (11936 bytes = 22.98% decrease) Quitting from lines 338-339 [unnamed-chunk-11] (V03_inputs_preparation_whitebox.Rmd) Error: processing vignette 'V03_inputs_preparation_whitebox.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V03_inputs_preparation_whitebox.Rmd’ SUMMARY: processing the following files failed: ‘V01_get_started.Rmd’ ‘V02_inputs_preparation_stars.Rmd’ ‘V03_inputs_preparation_whitebox.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.11
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘V01_get_started.Rmd’ using rmarkdown Quitting from lines 36-40 [unnamed-chunk-2] (V01_get_started.Rmd) Error: processing vignette 'V01_get_started.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V01_get_started.Rmd’ --- re-building ‘V02_inputs_preparation_stars.Rmd’ using rmarkdown Quitting from lines 87-89 [unnamed-chunk-6] (V02_inputs_preparation_stars.Rmd) Error: processing vignette 'V02_inputs_preparation_stars.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V02_inputs_preparation_stars.Rmd’ --- re-building ‘V03_inputs_preparation_whitebox.Rmd’ using rmarkdown sh: 1: /tmp/check-CRAN-regular-hornik/data/R/whitebox/WBT/whitebox_tools: not found trying URL 'https://www.whiteboxgeo.com/WBT_Linux/WhiteboxTools_linux_amd64.zip' Content type 'application/zip' length 24581859 bytes (23.4 MB) ================================================== downloaded 23.4 MB ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/transfR.Rcheck/vign_test/transfR/vignettes/V03_inputs_preparation_whitebox_files/figure-html/unnamed-chunk-7-1.png 672x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 54033 bytes Input file size = 54183 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42174 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42174 Output IDAT size = 42174 bytes (11859 bytes decrease) Output file size = 42252 bytes (11931 bytes = 22.02% decrease) ** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/transfR.Rcheck/vign_test/transfR/vignettes/V03_inputs_preparation_whitebox_files/figure-html/unnamed-chunk-9-1.png 672x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 51790 bytes Input file size = 51940 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39926 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39926 Output IDAT size = 39926 bytes (11864 bytes decrease) Output file size = 40004 bytes (11936 bytes = 22.98% decrease) Quitting from lines 338-339 [unnamed-chunk-11] (V03_inputs_preparation_whitebox.Rmd) Error: processing vignette 'V03_inputs_preparation_whitebox.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V03_inputs_preparation_whitebox.Rmd’ SUMMARY: processing the following files failed: ‘V01_get_started.Rmd’ ‘V02_inputs_preparation_stars.Rmd’ ‘V03_inputs_preparation_whitebox.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.0.11
Check: examples
Result: ERROR Running examples in ‘transfR-Ex.R’ failed The error most likely occurred in: > ### Name: as_transfr > ### Title: Create transfR object > ### Aliases: as_transfr > > ### ** Examples > > data(Oudon) > object <- as_transfr(st = Oudon$obs, hl = Oudon$hl) Error in UseMethod("set_units") : no applicable method for 'set_units' applied to an object of class "difftime" Calls: as_transfr -> <Anonymous> Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64

Version: 1.0.11
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘V01_get_started.Rmd’ using rmarkdown Quitting from lines 36-40 [unnamed-chunk-2] (V01_get_started.Rmd) Error: processing vignette 'V01_get_started.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V01_get_started.Rmd’ --- re-building ‘V02_inputs_preparation_stars.Rmd’ using rmarkdown Quitting from lines 87-89 [unnamed-chunk-6] (V02_inputs_preparation_stars.Rmd) Error: processing vignette 'V02_inputs_preparation_stars.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V02_inputs_preparation_stars.Rmd’ --- re-building ‘V03_inputs_preparation_whitebox.Rmd’ using rmarkdown sh: line 1: /data/gannet/ripley/.local/share/R/whitebox/WBT/whitebox_tools: No such file or directory trying URL 'https://www.whiteboxgeo.com/WBT_Linux/WhiteboxTools_linux_amd64.zip' Content type 'application/zip' length 24581859 bytes (23.4 MB) ================================================== downloaded 23.4 MB ** Processing: /data/gannet/ripley/R/packages/tests-clang/transfR.Rcheck/vign_test/transfR/vignettes/V03_inputs_preparation_whitebox_files/figure-html/unnamed-chunk-7-1.png 672x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 54044 bytes Input file size = 54194 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42166 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42166 Output IDAT size = 42166 bytes (11878 bytes decrease) Output file size = 42244 bytes (11950 bytes = 22.05% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-clang/transfR.Rcheck/vign_test/transfR/vignettes/V03_inputs_preparation_whitebox_files/figure-html/unnamed-chunk-9-1.png 672x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 51926 bytes Input file size = 52076 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40085 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 40085 Output IDAT size = 40085 bytes (11841 bytes decrease) Output file size = 40163 bytes (11913 bytes = 22.88% decrease) Quitting from lines 338-339 [unnamed-chunk-11] (V03_inputs_preparation_whitebox.Rmd) Error: processing vignette 'V03_inputs_preparation_whitebox.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V03_inputs_preparation_whitebox.Rmd’ SUMMARY: processing the following files failed: ‘V01_get_started.Rmd’ ‘V02_inputs_preparation_stars.Rmd’ ‘V03_inputs_preparation_whitebox.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.0.11
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘V01_get_started.Rmd’ using rmarkdown Quitting from lines 36-40 [unnamed-chunk-2] (V01_get_started.Rmd) Error: processing vignette 'V01_get_started.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V01_get_started.Rmd’ --- re-building ‘V02_inputs_preparation_stars.Rmd’ using rmarkdown Quitting from lines 87-89 [unnamed-chunk-6] (V02_inputs_preparation_stars.Rmd) Error: processing vignette 'V02_inputs_preparation_stars.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V02_inputs_preparation_stars.Rmd’ --- re-building ‘V03_inputs_preparation_whitebox.Rmd’ using rmarkdown sh: line 1: /data/gannet/ripley/.local/share/R/whitebox/WBT/whitebox_tools: No such file or directory trying URL 'https://www.whiteboxgeo.com/WBT_Linux/WhiteboxTools_linux_amd64.zip' Content type 'application/zip' length 24581859 bytes (23.4 MB) ================================================== downloaded 23.4 MB ** Processing: /data/gannet/ripley/R/packages/tests-devel/transfR.Rcheck/vign_test/transfR/vignettes/V03_inputs_preparation_whitebox_files/figure-html/unnamed-chunk-7-1.png 672x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 54049 bytes Input file size = 54199 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42171 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42171 Output IDAT size = 42171 bytes (11878 bytes decrease) Output file size = 42249 bytes (11950 bytes = 22.05% decrease) ** Processing: /data/gannet/ripley/R/packages/tests-devel/transfR.Rcheck/vign_test/transfR/vignettes/V03_inputs_preparation_whitebox_files/figure-html/unnamed-chunk-9-1.png 672x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 51806 bytes Input file size = 51956 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39945 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 39945 Output IDAT size = 39945 bytes (11861 bytes decrease) Output file size = 40023 bytes (11933 bytes = 22.97% decrease) Quitting from lines 338-339 [unnamed-chunk-11] (V03_inputs_preparation_whitebox.Rmd) Error: processing vignette 'V03_inputs_preparation_whitebox.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building ‘V03_inputs_preparation_whitebox.Rmd’ SUMMARY: processing the following files failed: ‘V01_get_started.Rmd’ ‘V02_inputs_preparation_stars.Rmd’ ‘V03_inputs_preparation_whitebox.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.0.11
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building 'V01_get_started.Rmd' using rmarkdown Quitting from lines 36-40 [unnamed-chunk-2] (V01_get_started.Rmd) Error: processing vignette 'V01_get_started.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building 'V01_get_started.Rmd' --- re-building 'V02_inputs_preparation_stars.Rmd' using rmarkdown Quitting from lines 87-89 [unnamed-chunk-6] (V02_inputs_preparation_stars.Rmd) Error: processing vignette 'V02_inputs_preparation_stars.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building 'V02_inputs_preparation_stars.Rmd' --- re-building 'V03_inputs_preparation_whitebox.Rmd' using rmarkdown trying URL 'https://www.whiteboxgeo.com/WBT_Windows/WhiteboxTools_win_amd64.zip' Content type 'application/zip' length 25512901 bytes (24.3 MB) ================================================== downloaded 24.3 MB Quitting from lines 338-339 [unnamed-chunk-11] (V03_inputs_preparation_whitebox.Rmd) Error: processing vignette 'V03_inputs_preparation_whitebox.Rmd' failed with diagnostics: no applicable method for 'set_units' applied to an object of class "difftime" --- failed re-building 'V03_inputs_preparation_whitebox.Rmd' SUMMARY: processing the following files failed: 'V01_get_started.Rmd' 'V02_inputs_preparation_stars.Rmd' 'V03_inputs_preparation_whitebox.Rmd' Error: Vignette re-building failed. Execution halted Flavor: r-devel-windows-x86_64