mbX: A Comprehensive Microbiome Data Processing Pipeline

Provides tools for cleaning, processing, and preparing microbiome sequencing data (e.g., 16S rRNA) for downstream analysis. Supports CSV, TXT, and 'Excel' file formats. The main function, ezclean(), automates microbiome data transformation, including format validation, transposition, numeric conversion, and metadata integration. Also ensures efficient handling of taxonomic levels, resolves duplicated taxa entries, and outputs a well-structured, analysis-ready dataset.

Version:	0.1.3
Imports:	tools, readxl, openxlsx, dplyr, tidyr, ggplot2
Suggests:	knitr, rmarkdown
Published:	2025-03-03
DOI:	10.32614/CRAN.package.mbX
Author:	Utsav Lamichhane [aut, cre]
Maintainer:	Utsav Lamichhane <utsav.lamichhane at gmail.com>
License:	MIT + file LICENSE
NeedsCompilation:	no
Materials:	README
CRAN checks:	mbX results

Documentation:

Reference manual:	mbX.pdf
Vignettes:	mbX Vignette (source)

Downloads:

Package source:	mbX_0.1.3.tar.gz
Windows binaries:	r-devel: not available, r-release: mbX_0.1.3.zip, r-oldrel: not available
macOS binaries:	r-devel (arm64): mbX_0.1.3.tgz, r-release (arm64): mbX_0.1.3.tgz, r-oldrel (arm64): mbX_0.1.3.tgz, r-devel (x86_64): mbX_0.1.3.tgz, r-release (x86_64): mbX_0.1.3.tgz, r-oldrel (x86_64): mbX_0.1.3.tgz

Linking:

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