xQTLbiolinks: Integrative Analysis of Quantitative Trait Locus Data of 'xQTL'

User can query, download, and visualize of molecular quantitative trait locus and gene expression data from public resources through the application programming interface <https://gtexportal.org/home/api-docs/index.html> of 'GTEx'.

Version: 1.2.2
Depends: R (≥ 4.00)
Imports: BiocGenerics, cowplot (≥ 1.1.1), curl (≥ 4.3.2), data.table (≥ 1.14.2), DBI, GenomeInfoDb, GenomicRanges, ggplot2 (≥ 3.3.6), ggrepel, ggridges, httr, IRanges, jsonlite (≥ 1.7.2), PupillometryR, RMySQL, scales, stringr (≥ 1.4.0), SummarizedExperiment (≥ 1.4.0), utils (≥ 4.0.3), viridis
Suggests: coloc, knitr, rtracklayer, usethis
Published: 2022-08-27
Author: Ruofan Ding [aut, cre], Xudong Zou [aut, ctb], Yangmei Qin [aut, ctb], Gao Wang [aut, ctb], Lei Li [aut, ctb, cph]
Maintainer: Ruofan Ding <dingruofan1 at foxmail.com>
BugReports: https://github.com/dingruofan/xQTLbiolinks/issues
License: GPL (≥ 3)
URL: https://github.com/dingruofan/xQTLbiolinks
NeedsCompilation: no
Materials: README NEWS
CRAN checks: xQTLbiolinks results


Reference manual: xQTLbiolinks.pdf
Vignettes: Colocalization_analysis_with_xQTLbiolinks


Package source: xQTLbiolinks_1.2.2.tar.gz
Windows binaries: r-devel: xQTLbiolinks_1.2.2.zip, r-release: xQTLbiolinks_1.2.2.zip, r-oldrel: xQTLbiolinks_1.2.2.zip
macOS binaries: r-release (arm64): xQTLbiolinks_1.2.2.tgz, r-oldrel (arm64): xQTLbiolinks_1.2.2.tgz, r-release (x86_64): xQTLbiolinks_1.2.2.tgz, r-oldrel (x86_64): xQTLbiolinks_1.2.2.tgz
Old sources: xQTLbiolinks archive


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