# Quality Control for Label-Free Proteomics Expression Data

## Documentation for package ‘lfproQC’ version 0.1.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

best_combination | Best combination of normalization and imputation method
Boxplot_data | Creating Boxplot for a dataset
Corrplot_data | Creating Correlation matrix plot for a dataset
Densityplot_data | Creating Density plot for a dataset
knn_rlr_yeast_data | Normalized and imputed complete yeast lysate - UPS1 benchmark dataset
MAplot_DE_fn | Find out the Up and Down regulated proteins from MA plot
MDSplot_data | Creating MDS plot for a dataset
QQplot_data | Creating QQ-Plot for a dataset
top_table_fn | Creating the top table
volcanoplot_DE_fn | Find out the Up and Down regulated proteins from volcano plot
yeast_data | Yeast lysate - UPS1 benchmark dataset
yeast_groups | Group information of Yeast lysate - UPS1 benchmark dataset
yeast_top_table | Top table for Yeast Lysate - UPS1 dataset