# revert 1.0.0
==========================
Stable release of the package 
- Process and annotate HGVS-syntax-like pathogenic mutations (snv/ins/del/delins/dup)
- Realign soft-clipped reads with flanking windows around the original alignment region 
  allowing large indels to identify large genomic rearrangements (LGRs)
- Realign 'on-target' reads to the reference sequence incorporating the pathogenic 
  mutation to identify hidden reversions
- Cover more scenarios (LGR for splice site variants; cryptic site for SNVs in 
  start codon, stop codon, splice donor, splice acceptor)
- Output a bam file that contains the realigned reads with added RG tag indicating 
  'Revertant' and 'NonRevertant' read groups


# revert 0.0.1
==========================
Beta release of the package, used for the identification of reversion mutations 
in DNA sequencing data

