Graphical Multiple Comparison Procedures

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Documentation for package ‘graphicalMCP’ version 0.3.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

adjust_p_bonferroni	Calculate adjusted p-values
adjust_p_hochberg	Calculate adjusted p-values
adjust_p_parametric	Calculate adjusted p-values
adjust_p_simes	Calculate adjusted p-values
adjust_weights_hochberg	Calculate adjusted hypothesis weights
adjust_weights_parametric	Calculate adjusted hypothesis weights
adjust_weights_simes	Calculate adjusted hypothesis weights
as_graphMCP	Convert between graphicalMCP, gMCP, and igraph graph classes
as_graphMCP.initial_graph	Convert between graphicalMCP, gMCP, and igraph graph classes
as_igraph	Convert between graphicalMCP, gMCP, and igraph graph classes
as_igraph.initial_graph	Convert between graphicalMCP, gMCP, and igraph graph classes
as_initial_graph	Convert between graphicalMCP, gMCP, and igraph graph classes
as_initial_graph.graphMCP	Convert between graphicalMCP, gMCP, and igraph graph classes
as_initial_graph.igraph	Convert between graphicalMCP, gMCP, and igraph graph classes
bonferroni	Example graphs of commonly used multiple comparison procedures
bonferroni_holm	Example graphs of commonly used multiple comparison procedures
bonferroni_holm_weighted	Example graphs of commonly used multiple comparison procedures
bonferroni_weighted	Example graphs of commonly used multiple comparison procedures
dunnett_closure_weighted	Example graphs of commonly used multiple comparison procedures
dunnett_single_step	Example graphs of commonly used multiple comparison procedures
dunnett_single_step_weighted	Example graphs of commonly used multiple comparison procedures
fallback	Example graphs of commonly used multiple comparison procedures
fallback_improved_1	Example graphs of commonly used multiple comparison procedures
fallback_improved_2	Example graphs of commonly used multiple comparison procedures
fixed_sequence	Example graphs of commonly used multiple comparison procedures
graph_calculate_power	Calculate power values for a graphical multiple comparison procedure
graph_create	Create the initial graph for a multiple comparison procedure
graph_generate_weights	Generate the weighting strategy based on a graphical multiple comparison procedure
graph_rejection_orderings	Find alternate rejection orderings (sequences) for shortcut tests
graph_test_closure	Perform closed graphical multiple comparison procedures
graph_test_shortcut	Perform shortcut (sequentially rejective) graphical multiple comparison procedures
graph_test_shortcut_gsd	Perform shortcut graphical multiple comparison procedures with group sequential designs
graph_update	Obtain an updated graph by updating an initial graphical after deleting hypotheses
gs_boundaries	Compute group sequential boundaries from an alpha spending function
gs_corr	Compute the correlation matrix for group sequential test statistics
hochberg	Example graphs of commonly used multiple comparison procedures
hommel	Example graphs of commonly used multiple comparison procedures
huque_etal	Example graphs of commonly used multiple comparison procedures
plot.initial_graph	S3 plot method for class 'initial_graph'
plot.updated_graph	S3 plot method for the class 'updated_graph'
print.graph_report	S3 print method for the class 'graph_report'
print.gsd_graph_report	S3 print method for the class 'gsd_graph_report'
print.initial_graph	S3 print method for the class 'initial_graph'
print.power_report	S3 print method for the class 'power_report'
print.updated_graph	S3 print method for the class 'updated_graph'
random_graph	Example graphs of commonly used multiple comparison procedures
repeated_p	Calculate the repeated p-value for a single hypothesis at a given analysis
sequential_p	Calculate the sequential p-value for a single hypothesis
sidak	Example graphs of commonly used multiple comparison procedures
simple_successive_1	Example graphs of commonly used multiple comparison procedures
simple_successive_2	Example graphs of commonly used multiple comparison procedures
spending_hsd	Alpha spending functions for group sequential designs
spending_linear	Alpha spending functions for group sequential designs
spending_of	Alpha spending functions for group sequential designs
spending_pocock	Alpha spending functions for group sequential designs
spending_with_time	Create a spending function with a custom spending time
spending_wt	Wang-Tsiatis spending function
three_doses_two_primary_two_secondary	Example graphs of commonly used multiple comparison procedures
two_doses_two_primary_two_secondary	Example graphs of commonly used multiple comparison procedures