f3f78b57957465619ff5fb774b8d59c0 *ChangeLog
c3c7e2415cd80dde12bb3c661f09db8a *DESCRIPTION
09b2baa55a6ce519e9ebb87042c9d91f *NAMESPACE
7227729fa56246b3139cd7375668d7eb *R/TESTING.R
462371d97cf6b7b9aa256df2107e0c51 *R/congruify.R
bf4c716f35eb57ae591529618d98dfd0 *R/deprecated.R
3a4c5212416ec23cddc260b58fbb9754 *R/disparity.R
db6ac3dc2ee0be4e13628a098d308f78 *R/diversification.R
a0db25d0062a8fad2216f52863b307b3 *R/diversitree.R
f794e580346ed592efb6849a11bce433 *R/edges.R
f386f58937b950aa32130ca37ec51152 *R/examples.R
dc48f893f2f9b6360fb038c175d9f7fa *R/gbresolve.R
c3fee92e14c9aced686aac5fa5a3a40d *R/glomogram.R
285c35cc58f185b13252e5577c19d963 *R/internal.R
be1b28c504d363fad3de6049e85293c9 *R/likelihood.R
fb6875656564fd1267842a21fb7c6066 *R/mecca.R
e4edcb91a3d883f3a8b35590d0710ad2 *R/medusa.R
60a4484da38659918f6a76c1835aefd6 *R/plotting.R
85cec4de49d32904341de662bd1e4e6b *R/postpred.R
60564cbb66d3b6c0bf4ef977fe6879a4 *R/proposals.R
55ca956156c71e1163d468d5c5e9a16d *R/rjmcmc.R
da77440e3ba963cfac39ac0b3b477780 *R/simulation.R
239dea7fe72f5b6615d242dc5af36fa0 *R/traits-fossil.R
2265a8adc0b3362a277113da43e22a6a *R/traits.R
5f8226a1c1b354bd0147cf9d79182176 *R/utilities-misc.R
8165041bf50330347a0a6de1c7156fa0 *R/utilities-phylo.R
3cfca60f7c78393c436e45f0e7c96229 *R/utilities-print.R
6a746701150db47c5a50cd22fc38b123 *R/utilities-stat.R
265f674a151d4c0c5f2cfbda458ed7c7 *README.md
b6adf6da014358fb49bf3f35d7f6d7d2 *data/amphibia.rda
3e887f67cecd3ec33bac6388447cf2ca *data/caniformia.rda
30bd1c33a30aa22c83e4c3532dbfc40a *data/carnivores.rda
8660fd2ee38e6755a5cf4a3a4aa5cca2 *data/caudata.rda
e097f93f848b100c9128e81ee3844e7d *data/chelonia.rda
20c2f2216156e00625b4517afb67c7c3 *data/geospiza.rda
8090f0e0c32765a2f2f797507f424769 *data/primates.rda
2310354d4fcc4919c578b51f5a63d539 *data/whales.rda
0366cf3f5b7dbebe9c107559a48918a7 *inst/CITATION
cf6ff064bb627bf81966c34d489a231a *man/aicm.Rd
4ab455fdc6497115102a2ae0cae37476 *man/aicw.Rd
e862c3a63277b315b308eeaaffa71bd2 *man/aov.phylo.Rd
7bb19d2cd57dc40ae042cc51012aff6b *man/bd.ms.Rd
3a22db64d4242f170928978b0e204401 *man/calibrate.mecca.Rd
31655c83745058d688a6d8e0de54aa51 *man/calibrate.rjmcmc.Rd
fb6a1d6e933351e1cc762c891a39d637 *man/congruify.phylo.Rd
90850dc6414b2fba56576387b047705f *man/dcount.Rd
6568d578201ea42b2e31267c0b6f4a8c *man/drop.extinct.Rd
8cc05ced097170f418a40c57bd4e24ce *man/dtt.Rd
1c27742f4cc6d7f5d809fe2ecc99195f *man/fitContinuous.Rd
09c57a750b1d79f923f1ec95c3717b83 *man/fitContinuousMCMC.Rd
14836b82bedeeec9313e7224eaa3c884 *man/fitDiscrete.Rd
ea1c4898013b91a237a3e061754b005a *man/gbresolve.Rd
ffd09c17a3c59dd1c8de0ecfe6c6276b *man/geiger-data.Rd
ba7360ac9b6234a2c0e33da914788ccc *man/geiger-defunct.Rd
74bfc22e335fddada7e0b6d5c7b14428 *man/geiger-examples.Rd
4f0786d9a4dd152fd2ab22893aabe361 *man/geiger-internal.Rd
3ca7f3459e4beff21bb065fbcddcc642 *man/geiger-package.Rd
7e7bda82c466b989c7e86bca572851cd *man/load.rjmcmc.Rd
9dc5e3eedba319f4819480bee2ebf2cf *man/make.gbm.Rd
a4d53707d58c22d4cf24d4a30ae170f0 *man/mecca.Rd
6313c33d2ad3619a9d8208c46824ff7e *man/medusa.Rd
46556e5318a78a88f8aa1ceea3c79d3e *man/name.check.Rd
96a1c45c39b6673c78f5844c0094f939 *man/nh.test.Rd
2024162c0319c40b58fbe4587353cca3 *man/nodelabel.phylo.Rd
fe02f97ca929aedb0d579d1eed7a5aea *man/plot.medusa.Rd
35d6545a909ccd864d980d50e0126a98 *man/pp.mcmc.Rd
77b4e52f1c77dd209bba2b9ef406d18f *man/r8s.phylo.Rd
e1738c37d8e9568125c49b66fb7e5a85 *man/ratematrix.Rd
a2913d72a69cd7cf4f461f3b40d9df46 *man/rc.Rd
2202c423e49419793b4c406fbc42693a *man/rescale.phylo.Rd
660a150342914550b6266acfef7136bf *man/rjmcmc.bm.Rd
2708d39044fdb4b6304a3cd14b9e82fa *man/sim.bd.Rd
f264909ffe5468b34d4f999d1cbf1176 *man/sim.bdtree.Rd
bf50a1462ffd68485091857fca542c56 *man/sim.char.Rd
a9a6b7539b29d665e2d63c20521db066 *man/startingpt.mecca.Rd
ce7c978a05211b7e8bef13f2e1f20198 *man/subset.phylo.Rd
7dd89e661d27d71908ab27b1867f3688 *man/tips.Rd
18cdda39a1fc77156b47d4d00bcff7f9 *man/to.auteur.Rd
f8e5b6e7bc1c8cf0672a359f0c091f4d *man/treedata.Rd
db9321b87931f45f6253452ba5d4bbe2 *src/APE_reorder_phylo.c
4a000ee196d5240b54066c1bf9d1615f *src/Makevars
4a000ee196d5240b54066c1bf9d1615f *src/Makevars.win
d4a100a7aee82700cda78a3e42b82701 *src/branches.cpp
46b435bdf1ed1a724636b0384a4f189e *src/init.c
76ea81a164bff6ae19174e7fb38d7e85 *src/mkn.c
306fe6c50686c358bfd16275bd7a2627 *src/mkn.h
4cf61628872195641181a40ff4a5f0c1 *src/pic.c
20f7963910d4b81b2d5abb8ea7612bf0 *src/util.c
126a0df0c6425714a93a320fa4807ea5 *src/util.h
8b2ab790c8f867d1602759e3821e513a *src/utilities.cpp
