Last updated on 2026-11-13 02:59:28 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.0.2 | 6.92 | 222.81 | 229.73 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.0.2 | 4.47 | 159.05 | 163.52 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.0.2 | 158.89 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.0.2 | 156.85 | OK | |||
| r-devel-windows-x86_64 | 2.0.2 | 11.00 | 199.00 | 210.00 | OK | |
| r-patched-linux-x86_64 | 2.0.2 | 5.82 | 207.80 | 213.62 | OK | |
| r-release-linux-x86_64 | 2.0.2 | 6.71 | 211.28 | 217.99 | OK | |
| r-release-macos-arm64 | 2.0.2 | 2.00 | 43.00 | 45.00 | OK | |
| r-release-macos-x86_64 | 2.0.2 | 5.00 | 264.00 | 269.00 | OK | |
| r-release-windows-x86_64 | 2.0.2 | 8.00 | 179.00 | 187.00 | OK | |
| r-oldrel-macos-arm64 | 2.0.2 | 2.00 | 58.00 | 60.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.0.2 | 5.00 | 275.00 | 280.00 | OK | |
| r-oldrel-windows-x86_64 | 2.0.2 | 11.00 | 236.00 | 247.00 | OK |
Version: 2.0.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [43s/23s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(FCO)
>
> test_check("FCO")
This is lavaan 0.7-3
lavaan is FREE software! Please report any bugs.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Merging is selected as the discriminant validity testing option given the provided arguments.
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is kurtosis and skewness unequal to 1 when assume.mvn is FALSE?", { out <- gen_fit(mod1 = mod, x = bb1992, rep = 10, assume.mvn = FALSE) expect_gt(FCO:::mardia(out$x)[1], 1) expect_gt(FCO:::mardia(out$x)[1], 1) })
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
Traceback:
20: 1: tryCatch(expr, error = function(e) {lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) call <- conditionCall(e)
if (!is.null(call)) { 2: if (identical(call[[1L]], quote(doTryCatch))) lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, call <- sys.call(-4L) fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, dcall <- deparse(call, nlines = 1L) slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, prefix <- paste("Error in", dcall, ": ") unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], LONG <- 75L sampling_weights_type = swt_type) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") 3: if (is.na(w)) lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], wls_v = wls_v, nacov = nacov) type = "b")
if (w > LONG) 4: prefix <- paste0(prefix, "\n ") }lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, else prefix <- "Error : " lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, msg <- paste0(prefix, conditionMessage(e), "\n") sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, .Internal(seterrmessage(msg[1L])) ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile) 5: .Internal(printDeferredWarnings())lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, } std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") invisible(structure(msg, class = "try-error", condition = e))
})
6: 21: eval(sc, parent.frame())try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: 7: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))eval(sc, parent.frame())
23:
FUN(X[[i]], ...) 8:
lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, 24: std.lv = TRUE, warn = FALSE)lapply(seq_len(cores), inner.do)
9: 25: doTryCatch(return(expr), name, parentenv, handler)parallel::mclapply(1:rep, function(r) {
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, 10: free1 = free, s = s, k = k, nf = nf)tryCatchOne(expr, names, parentenv, handlers[[1L]])}, mc.cores = cores)
11: 26: tryCatchList(expr, classes, parentenv, handlers)
gen_fit(mod1 = mod, x = bb1992, rep = 10)12:
tryCatch(expr, error = function(e) {27: eval(code, test_env) call <- conditionCall(e)
if (!is.null(call)) {28: if (identical(call[[1L]], quote(doTryCatch))) eval(code, test_env) call <- sys.call(-4L)
dcall <- deparse(call, nlines = 1L)29: withCallingHandlers({ prefix <- paste("Error in", dcall, ": ") eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations LONG <- 75L if (snapshot_skipped) { sm <- strsplit(conditionMessage(e), "\n")[[1L]] skip("On CRAN") w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") } if (is.na(w)) else if (!new_expectations && skip_on_empty) { w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], skip_empty() type = "b") } if (w > LONG) }, expectation = handle_expectation, packageNotFoundError = function(e) { prefix <- paste0(prefix, "\n ") } if (on_cran()) { else prefix <- "Error : " skip(paste0("{", e$package, "} is not installed.")) msg <- paste0(prefix, conditionMessage(e), "\n") } .Internal(seterrmessage(msg[1L]))}, snapshot_on_cran = function(cnd) { if (!silent && isTRUE(getOption("show.error.messages"))) { snapshot_skipped <<- TRUE cat(msg, file = outFile) invokeRestart("muffle_cran_snapshot") .Internal(printDeferredWarnings())}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt) invisible(structure(msg, class = "try-error", condition = e))
})30:
doTryCatch(return(expr), name, parentenv, handler)13:
try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, 31: std.lv = TRUE, warn = FALSE), silent = TRUE)tryCatchOne(expr, names, parentenv, handlers[[1L]])
14: 32: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, tryCatchList(expr, classes, parentenv, handlers) free1 = free, s = s, k = k, nf = nf)
33: 15: tryCatch(withCallingHandlers({FUN(X[[i]], ...) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {16: skip("On CRAN")lapply(X = S, FUN = FUN, ...) }
else if (!new_expectations && skip_on_empty) {17: skip_empty()doTryCatch(return(expr), name, parentenv, handler) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {18: if (on_cran()) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip(paste0("{", e$package, "} is not installed."))
}19: }, snapshot_on_cran = function(cnd) {tryCatchList(expr, classes, parentenv, handlers) snapshot_skipped <<- TRUE
invokeRestart("muffle_cran_snapshot")20: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatch(expr, error = function(e) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal) call <- conditionCall(e)
if (!is.null(call)) {34: if (identical(call[[1L]], quote(doTryCatch))) doWithOneRestart(return(expr), restart) call <- sys.call(-4L)
dcall <- deparse(call, nlines = 1L)35: prefix <- paste("Error in", dcall, ": ")withOneRestart(expr, restarts[[1L]]) LONG <- 75L
sm <- strsplit(conditionMessage(e), "\n")[[1L]]36: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")withRestarts(tryCatch(withCallingHandlers({ if (is.na(w)) eval(code, test_env) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], new_expectations <- the$test_expectations > starting_expectations type = "b") if (snapshot_skipped) { if (w > LONG) skip("On CRAN") prefix <- paste0(prefix, "\n ") } } else if (!new_expectations && skip_on_empty) { else prefix <- "Error : " skip_empty() msg <- paste0(prefix, conditionMessage(e), "\n") } .Internal(seterrmessage(msg[1L]))}, expectation = handle_expectation, packageNotFoundError = function(e) { if (!silent && isTRUE(getOption("show.error.messages"))) { if (on_cran()) { cat(msg, file = outFile) skip(paste0("{", e$package, "} is not installed.")) .Internal(printDeferredWarnings()) } }}, snapshot_on_cran = function(cnd) { invisible(structure(msg, class = "try-error", condition = e)) snapshot_skipped <<- TRUE}) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 21: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), try(lapply(X = S, FUN = FUN, ...), silent = TRUE) end_test = function() {
})22:
sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))37:
test_code(code, parent.frame())23:
38: FUN(X[[i]], ...)test_that("Is the seed set properly?", {
out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10)24: out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)lapply(seq_len(cores), inner.do) expect_equal(out1$seed, out2$seed)
})25:
parallel::mclapply(1:rep, function(r) {39: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, eval(code, test_env) free1 = free, s = s, k = k, nf = nf)
}, mc.cores = cores)40:
eval(code, test_env)
26: 41: gen_fit(mod1 = mod, x = bb1992, rep = 10)withCallingHandlers({
eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN")27: }eval(code, test_env) else if (!new_expectations && skip_on_empty) {
skip_empty()28: }eval(code, test_env)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {29: withCallingHandlers({ skip(paste0("{", e$package, "} is not installed.")) eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations}, snapshot_on_cran = function(cnd) { if (snapshot_skipped) { snapshot_skipped <<- TRUE skip("On CRAN") } invokeRestart("muffle_cran_snapshot") else if (!new_expectations && skip_on_empty) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip_empty() error = handle_error, interrupt = handle_interrupt)
}42: }, expectation = handle_expectation, packageNotFoundError = function(e) {doTryCatch(return(expr), name, parentenv, handler) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed."))43: tryCatchOne(expr, names, parentenv, handlers[[1L]]) }
}, snapshot_on_cran = function(cnd) {44: snapshot_skipped <<- TRUEtryCatchList(expr, classes, parentenv, handlers) invokeRestart("muffle_cran_snapshot")
45: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatch(withCallingHandlers({ error = handle_error, interrupt = handle_interrupt) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations30: if (snapshot_skipped) {doTryCatch(return(expr), name, parentenv, handler) skip("On CRAN") }
else if (!new_expectations && skip_on_empty) { skip_empty()31: }tryCatchOne(expr, names, parentenv, handlers[[1L]])}, expectation = handle_expectation, packageNotFoundError = function(e) {
32: if (on_cran()) {tryCatchList(expr, classes, parentenv, handlers) skip(paste0("{", e$package, "} is not installed."))
}33: }, snapshot_on_cran = function(cnd) {tryCatch(withCallingHandlers({ snapshot_skipped <<- TRUE eval(code, test_env) invokeRestart("muffle_cran_snapshot") new_expectations <- the$test_expectations > starting_expectations}, skip = handle_skip, warning = handle_warning, message = handle_message, if (snapshot_skipped) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal) skip("On CRAN")
}46: doWithOneRestart(return(expr), restart) else if (!new_expectations && skip_on_empty) {
skip_empty()47: }withOneRestart(expr, restarts[[1L]])}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {48: skip(paste0("{", e$package, "} is not installed."))withRestarts(tryCatch(withCallingHandlers({ } eval(code, test_env)}, snapshot_on_cran = function(cnd) { new_expectations <- the$test_expectations > starting_expectations snapshot_skipped <<- TRUE if (snapshot_skipped) { invokeRestart("muffle_cran_snapshot") skip("On CRAN")}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal) else if (!new_expectations && skip_on_empty) {
skip_empty()34: }doWithOneRestart(return(expr), restart)}, expectation = handle_expectation, packageNotFoundError = function(e) {
if (on_cran()) {35: skip(paste0("{", e$package, "} is not installed."))withOneRestart(expr, restarts[[1L]]) }}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")36: }, skip = handle_skip, warning = handle_warning, message = handle_message, withRestarts(tryCatch(withCallingHandlers({ error = handle_error, interrupt = handle_interrupt), error = handle_fatal), eval(code, test_env) end_test = function() { new_expectations <- the$test_expectations > starting_expectations }) if (snapshot_skipped) {
skip("On CRAN")49: }test_code(code = exprs, env = env, reporter = get_reporter() %||% else if (!new_expectations && skip_on_empty) { StopReporter$new()) skip_empty()
}50: }, expectation = handle_expectation, packageNotFoundError = function(e) {source_file(path, env = env(env), desc = desc, shuffle = shuffle, if (on_cran()) { error_call = error_call) skip(paste0("{", e$package, "} is not installed."))
51: }FUN(X[[i]], ...)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE52: invokeRestart("muffle_cran_snapshot")lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, }, skip = handle_skip, warning = handle_warning, message = handle_message, error_call = error_call) error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
end_test = function() {53: })doTryCatch(return(expr), name, parentenv, handler)
37: 54: test_code(code, parent.frame())tryCatchOne(expr, names, parentenv, handlers[[1L]])
38: 55: test_that("Is the seed set properly?", {tryCatchList(expr, classes, parentenv, handlers) out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10)
out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)56: expect_equal(out1$seed, out2$seed)tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n")})
NULL})39:
eval(code, test_env)57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
40: 58: test_files_serial(test_dir = test_dir, test_package = test_package, eval(code, test_env) test_paths = test_paths, load_helpers = load_helpers, reporter = reporter,
env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, 41: desc = desc, load_package = load_package, shuffle = shuffle, withCallingHandlers({ error_call = error_call) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations59: if (snapshot_skipped) {test_files(test_dir = path, test_paths = test_paths, test_package = package, skip("On CRAN") reporter = reporter, load_helpers = load_helpers, env = env, } stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, else if (!new_expectations && skip_on_empty) { load_package = load_package, parallel = parallel, shuffle = shuffle) skip_empty() }
}, expectation = handle_expectation, packageNotFoundError = function(e) {60: if (on_cran()) {test_dir("testthat", package = package, reporter = reporter, skip(paste0("{", e$package, "} is not installed.")) ..., load_package = "installed") }
}, snapshot_on_cran = function(cnd) {61: snapshot_skipped <<- TRUEtest_check("FCO") invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, An irrecoverable exception occurred. R is aborting now ...
error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
*** caught segfault ***
24: address 0x110, cause 'invalid permissions'
lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code, parent.frame())
38: test_that("Is the seed set properly?", { out1 <- gen_fit(mod1 = mod, x = bb1992, rep = 10) out2 <- gen_fit(mod1 = mod, x = bb1992, rep = 10, seed = 1111) expect_equal(out1$seed, out2$seed)})
39: eval(code, test_env)
40: eval(code, test_env)
41: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
42: doTryCatch(return(expr), name, parentenv, handler)
43: tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: tryCatchList(expr, classes, parentenv, handlers)
45: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
46: doWithOneRestart(return(expr), restart)
47: withOneRestart(expr, restarts[[1L]])
48: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
49: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
50: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
51: FUN(X[[i]], ...)
52: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
53: doTryCatch(return(expr), name, parentenv, handler)
54: tryCatchOne(expr, names, parentenv, handlers[[1L]])
55: tryCatchList(expr, classes, parentenv, handlers)
56: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
57: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
58: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
59: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
60: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
61: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure,
Traceback:
slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, 1: unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) sampling_weights_type = swt_type)
2: 3: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, wls_v = wls_v, nacov = nacov) slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one,
unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type) 4:
lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, 3: sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) wls_v = wls_v, nacov = nacov)
5: 4: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov,
sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, 6: ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)eval(sc, parent.frame())
5: 7: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, eval(sc, parent.frame()) std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: 8: eval(sc, parent.frame())lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
std.lv = TRUE, warn = FALSE) 7: eval(sc, parent.frame())
9: 8: doTryCatch(return(expr), name, parentenv, handler)lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
std.lv = TRUE, warn = FALSE)10:
tryCatchOne(expr, names, parentenv, handlers[[1L]]) 9:
doTryCatch(return(expr), name, parentenv, handler)11:
tryCatchList(expr, classes, parentenv, handlers)10:
tryCatchOne(expr, names, parentenv, handlers[[1L]])12:
tryCatch(expr, error = function(e) {11: call <- conditionCall(e)tryCatchList(expr, classes, parentenv, handlers) if (!is.null(call)) {
if (identical(call[[1L]], quote(doTryCatch))) 12: call <- sys.call(-4L)tryCatch(expr, error = function(e) { dcall <- deparse(call, nlines = 1L) call <- conditionCall(e) prefix <- paste("Error in", dcall, ": ") if (!is.null(call)) { LONG <- 75L if (identical(call[[1L]], quote(doTryCatch))) sm <- strsplit(conditionMessage(e), "\n")[[1L]] call <- sys.call(-4L) w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") dcall <- deparse(call, nlines = 1L) if (is.na(w)) prefix <- paste("Error in", dcall, ": ") w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] type = "b") w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (w > LONG) if (is.na(w)) prefix <- paste0(prefix, "\n ") w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], } type = "b") else prefix <- "Error : " if (w > LONG) msg <- paste0(prefix, conditionMessage(e), "\n") prefix <- paste0(prefix, "\n ") .Internal(seterrmessage(msg[1L])) } if (!silent && isTRUE(getOption("show.error.messages"))) { else prefix <- "Error : " cat(msg, file = outFile) msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(printDeferredWarnings()) .Internal(seterrmessage(msg[1L])) } if (!silent && isTRUE(getOption("show.error.messages"))) { invisible(structure(msg, class = "try-error", condition = e)) cat(msg, file = outFile)}) .Internal(printDeferredWarnings())
}13: invisible(structure(msg, class = "try-error", condition = e))try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, }) std.lv = TRUE, warn = FALSE), silent = TRUE)
13: 14: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, std.lv = TRUE, warn = FALSE), silent = TRUE) free1 = free, s = s, k = k, nf = nf)
14: 15: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, FUN(X[[i]], ...) free1 = free, s = s, k = k, nf = nf)
16: 15: FUN(X[[i]], ...)lapply(X = S, FUN = FUN, ...)
16: 17: lapply(X = S, FUN = FUN, ...)doTryCatch(return(expr), name, parentenv, handler)
17: 18: doTryCatch(return(expr), name, parentenv, handler)tryCatchOne(expr, names, parentenv, handlers[[1L]])
18: 19: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchList(expr, classes, parentenv, handlers)
19: 20: tryCatchList(expr, classes, parentenv, handlers)tryCatch(expr, error = function(e) {
call <- conditionCall(e)20: if (!is.null(call)) {tryCatch(expr, error = function(e) { if (identical(call[[1L]], quote(doTryCatch))) call <- conditionCall(e) call <- sys.call(-4L) if (!is.null(call)) { dcall <- deparse(call, nlines = 1L) if (identical(call[[1L]], quote(doTryCatch))) prefix <- paste("Error in", dcall, ": ") call <- sys.call(-4L) LONG <- 75L dcall <- deparse(call, nlines = 1L) sm <- strsplit(conditionMessage(e), "\n")[[1L]] prefix <- paste("Error in", dcall, ": ") w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") LONG <- 75L if (is.na(w)) sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") type = "b") if (is.na(w)) if (w > LONG) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], prefix <- paste0(prefix, "\n ") type = "b") } if (w > LONG) else prefix <- "Error : " prefix <- paste0(prefix, "\n ") msg <- paste0(prefix, conditionMessage(e), "\n") } .Internal(seterrmessage(msg[1L])) else prefix <- "Error : " if (!silent && isTRUE(getOption("show.error.messages"))) { msg <- paste0(prefix, conditionMessage(e), "\n") cat(msg, file = outFile) .Internal(seterrmessage(msg[1L])) .Internal(printDeferredWarnings()) if (!silent && isTRUE(getOption("show.error.messages"))) { } cat(msg, file = outFile) invisible(structure(msg, class = "try-error", condition = e)) .Internal(printDeferredWarnings())}) }
invisible(structure(msg, class = "try-error", condition = e))21: })try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
21: 22: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
22: 23: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))FUN(X[[i]], ...)
23: 24: FUN(X[[i]], ...)lapply(seq_len(cores), inner.do)
24: lapply(seq_len(cores), inner.do)25:
parallel::mclapply(1:rep, function(r) {25: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, parallel::mclapply(1:rep, function(r) { free1 = free, s = s, k = k, nf = nf) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, }, mc.cores = cores) free1 = free, s = s, k = k, nf = nf)
}, mc.cores = cores)
26: 26: gen_fit(mod1 = mod, x = bb1992, rep = 10)gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: 27: eval(code, test_env)eval(code, test_env)
28: 28: eval(code, test_env)eval(code, test_env)
29: 29: withCallingHandlers({withCallingHandlers({ eval(code, test_env) eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { if (snapshot_skipped) { skip("On CRAN") skip("On CRAN") } } else if (!new_expectations && skip_on_empty) { else if (!new_expectations && skip_on_empty) { skip_empty() skip_empty() } }}, expectation = handle_expectation, packageNotFoundError = function(e) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) skip(paste0("{", e$package, "} is not installed.")) } }}, snapshot_on_cran = function(cnd) {}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, }, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt) error = handle_error, interrupt = handle_interrupt)
30: 30: doTryCatch(return(expr), name, parentenv, handler)doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])31:
tryCatchOne(expr, names, parentenv, handlers[[1L]])32:
tryCatchList(expr, classes, parentenv, handlers)32:
tryCatchList(expr, classes, parentenv, handlers)33:
tryCatch(withCallingHandlers({33: eval(code, test_env)tryCatch(withCallingHandlers({ new_expectations <- the$test_expectations > starting_expectations eval(code, test_env) if (snapshot_skipped) { new_expectations <- the$test_expectations > starting_expectations skip("On CRAN") if (snapshot_skipped) { } skip("On CRAN") else if (!new_expectations && skip_on_empty) { } skip_empty() else if (!new_expectations && skip_on_empty) { } skip_empty()}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) {}, snapshot_on_cran = function(cnd) { skip(paste0("{", e$package, "} is not installed.")) snapshot_skipped <<- TRUE } invokeRestart("muffle_cran_snapshot")}, snapshot_on_cran = function(cnd) {}, skip = handle_skip, warning = handle_warning, message = handle_message, snapshot_skipped <<- TRUE error = handle_error, interrupt = handle_interrupt), error = handle_fatal) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 34: error = handle_error, interrupt = handle_interrupt), error = handle_fatal)doWithOneRestart(return(expr), restart)
35: 34: withOneRestart(expr, restarts[[1L]])doWithOneRestart(return(expr), restart)
36: 35: withRestarts(tryCatch(withCallingHandlers({withOneRestart(expr, restarts[[1L]]) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations36: if (snapshot_skipped) {withRestarts(tryCatch(withCallingHandlers({ skip("On CRAN") eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations else if (!new_expectations && skip_on_empty) { if (snapshot_skipped) { skip_empty() skip("On CRAN") } }}, expectation = handle_expectation, packageNotFoundError = function(e) { else if (!new_expectations && skip_on_empty) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) skip_empty() }}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE}, expectation = handle_expectation, packageNotFoundError = function(e) { invokeRestart("muffle_cran_snapshot") if (on_cran()) {}, skip = handle_skip, warning = handle_warning, message = handle_message, skip(paste0("{", e$package, "} is not installed.")) } error = handle_error, interrupt = handle_interrupt), error = handle_fatal), }, snapshot_on_cran = function(cnd) { end_test = function() { snapshot_skipped <<- TRUE }) invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 37: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), test_code(code = exprs, env = env, reporter = get_reporter() %||% end_test = function() { StopReporter$new()) })
38: 37: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)test_code(code = exprs, env = env, reporter = get_reporter() %||%
StopReporter$new())39:
FUN(X[[i]], ...)38:
source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)40:
39: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, FUN(X[[i]], ...) error_call = error_call)
41: 40: doTryCatch(return(expr), name, parentenv, handler)lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle,
error_call = error_call)42:
tryCatchOne(expr, names, parentenv, handlers[[1L]])41:
doTryCatch(return(expr), name, parentenv, handler)43:
tryCatchList(expr, classes, parentenv, handlers)42:
tryCatchOne(expr, names, parentenv, handlers[[1L]])
44: 43: tryCatch(code, testthat_abort_reporter = function(cnd) {tryCatchList(expr, classes, parentenv, handlers) cat(conditionMessage(cnd), "\n")
NULL44: tryCatch(code, testthat_abort_reporter = function(cnd) {}) cat(conditionMessage(cnd), "\n")
NULL45: })with_reporter(reporters$multi, lapply(test_paths, test_one_file,
env = env, desc = desc, shuffle = shuffle, error_call = error_call))45:
with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))46:
test_files_serial(test_dir = test_dir, test_package = test_package, 46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call) error_call = error_call)
47: 47: test_files(test_dir = path, test_paths = test_paths, test_package = package, test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle) load_package = load_package, parallel = parallel, shuffle = shuffle)
48: 48: test_dir("testthat", package = package, reporter = reporter, test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed") ..., load_package = "installed")
49: 49: test_check("FCO")test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
An irrecoverable exception occurred. R is aborting now ...
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE,
Traceback:
std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") 1:
lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) 6:
eval(sc, parent.frame()) 2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx,
fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, 7: slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, eval(sc, parent.frame()) unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]],
sampling_weights_type = swt_type) 8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
std.lv = TRUE, warn = FALSE)
3: 9: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, doTryCatch(return(expr), name, parentenv, handler) wls_v = wls_v, nacov = nacov)
10: 4: tryCatchOne(expr, names, parentenv, handlers[[1L]])
lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, 11: lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, tryCatchList(expr, classes, parentenv, handlers) sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs,
ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)12:
tryCatch(expr, error = function(e) { 5: call <- conditionCall(e)lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa") if (!is.null(call)) {
if (identical(call[[1L]], quote(doTryCatch))) 6: call <- sys.call(-4L)eval(sc, parent.frame()) dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ") 7: LONG <- 75Leval(sc, parent.frame()) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") 8: if (is.na(w)) lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], std.lv = TRUE, warn = FALSE) type = "b") if (w > LONG)
prefix <- paste0(prefix, "\n ") 9: }doTryCatch(return(expr), name, parentenv, handler) else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n")10: .Internal(seterrmessage(msg[1L]))tryCatchOne(expr, names, parentenv, handlers[[1L]]) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile)11: tryCatchList(expr, classes, parentenv, handlers) .Internal(printDeferredWarnings())
12: }tryCatch(expr, error = function(e) { invisible(structure(msg, class = "try-error", condition = e)) call <- conditionCall(e) if (!is.null(call)) {}) if (identical(call[[1L]], quote(doTryCatch)))
call <- sys.call(-4L)13: dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ")try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, LONG <- 75L std.lv = TRUE, warn = FALSE), silent = TRUE) sm <- strsplit(conditionMessage(e), "\n")[[1L]]
w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")14: if (is.na(w)) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], free1 = free1, free2 = free2, s = s, k = k, nf = nf) type = "b")
15: if (w > LONG) FUN(X[[i]], ...) prefix <- paste0(prefix, "\n ")
}16: else prefix <- "Error : "lapply(X = S, FUN = FUN, ...) msg <- paste0(prefix, conditionMessage(e), "\n")
.Internal(seterrmessage(msg[1L]))17: if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)doTryCatch(return(expr), name, parentenv, handler) .Internal(printDeferredWarnings())
}18: invisible(structure(msg, class = "try-error", condition = e))tryCatchOne(expr, names, parentenv, handlers[[1L]])})
19: 13: tryCatchList(expr, classes, parentenv, handlers)try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
20: std.lv = TRUE, warn = FALSE), silent = TRUE)tryCatch(expr, error = function(e) {
call <- conditionCall(e)14: if (!is.null(call)) {generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, if (identical(call[[1L]], quote(doTryCatch))) free1 = free1, free2 = free2, s = s, k = k, nf = nf) call <- sys.call(-4L)
dcall <- deparse(call, nlines = 1L)15: prefix <- paste("Error in", dcall, ": ")FUN(X[[i]], ...) LONG <- 75L
sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")16: if (is.na(w)) lapply(X = S, FUN = FUN, ...) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L],
type = "b")17: if (w > LONG) doTryCatch(return(expr), name, parentenv, handler) prefix <- paste0(prefix, "\n ")
}18: else prefix <- "Error : "tryCatchOne(expr, names, parentenv, handlers[[1L]]) msg <- paste0(prefix, conditionMessage(e), "\n")
19: .Internal(seterrmessage(msg[1L]))tryCatchList(expr, classes, parentenv, handlers) if (!silent && isTRUE(getOption("show.error.messages"))) {
cat(msg, file = outFile) .Internal(printDeferredWarnings())20: }tryCatch(expr, error = function(e) { invisible(structure(msg, class = "try-error", condition = e)) call <- conditionCall(e)}) if (!is.null(call)) {
if (identical(call[[1L]], quote(doTryCatch))) 21: call <- sys.call(-4L)try(lapply(X = S, FUN = FUN, ...), silent = TRUE) dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ")22: LONG <- 75LsendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
sm <- strsplit(conditionMessage(e), "\n")[[1L]]23: w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")FUN(X[[i]], ...)
if (is.na(w)) 24: w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], lapply(seq_len(cores), inner.do)
type = "b")25: parallel::mclapply(1:rep, function(r) { if (w > LONG) generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf) prefix <- paste0(prefix, "\n ")}, mc.cores = cores)
}26: gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10) else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n")
.Internal(seterrmessage(msg[1L]))27: if (!silent && isTRUE(getOption("show.error.messages"))) {eval(code, test_env) cat(msg, file = outFile)
.Internal(printDeferredWarnings())28: }eval(code, test_env) invisible(structure(msg, class = "try-error", condition = e))
})29:
withCallingHandlers({21: eval(code, test_env)try(lapply(X = S, FUN = FUN, ...), silent = TRUE) new_expectations <- the$test_expectations > starting_expectations
if (snapshot_skipped) {22: skip("On CRAN") }sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) else if (!new_expectations && skip_on_empty) {
skip_empty() }23: }, expectation = handle_expectation, packageNotFoundError = function(e) {FUN(X[[i]], ...) if (on_cran()) {
skip(paste0("{", e$package, "} is not installed."))24: lapply(seq_len(cores), inner.do) }
}, snapshot_on_cran = function(cnd) {25: snapshot_skipped <<- TRUEparallel::mclapply(1:rep, function(r) { invokeRestart("muffle_cran_snapshot") generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, }, skip = handle_skip, warning = handle_warning, message = handle_message, free1 = free1, free2 = free2, s = s, k = k, nf = nf) error = handle_error, interrupt = handle_interrupt)}, mc.cores = cores)
30: 26: doTryCatch(return(expr), name, parentenv, handler)gen_fit(mod1 = mod, mod2 = mod2, x = bb1992, rep = 10)
31: 27: eval(code, test_env)tryCatchOne(expr, names, parentenv, handlers[[1L]])
28: 32: tryCatchList(expr, classes, parentenv, handlers)eval(code, test_env)
33: 29: tryCatch(withCallingHandlers({withCallingHandlers({ eval(code, test_env) eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip("On CRAN") skip_empty() } }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { else if (!new_expectations && skip_on_empty) { skip_empty() skip(paste0("{", e$package, "} is not installed.")) } }}, expectation = handle_expectation, packageNotFoundError = function(e) {}, snapshot_on_cran = function(cnd) { if (on_cran()) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") skip(paste0("{", e$package, "} is not installed.")) }}, skip = handle_skip, warning = handle_warning, message = handle_message, }, snapshot_on_cran = function(cnd) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")
}, skip = handle_skip, warning = handle_warning, message = handle_message, 34: error = handle_error, interrupt = handle_interrupt)doWithOneRestart(return(expr), restart)
35: 30: withOneRestart(expr, restarts[[1L]])doTryCatch(return(expr), name, parentenv, handler)
36: 31: withRestarts(tryCatch(withCallingHandlers({tryCatchOne(expr, names, parentenv, handlers[[1L]]) eval(code, test_env)
new_expectations <- the$test_expectations > starting_expectations32: if (snapshot_skipped) {tryCatchList(expr, classes, parentenv, handlers) skip("On CRAN")
}33: else if (!new_expectations && skip_on_empty) {tryCatch(withCallingHandlers({ skip_empty() eval(code, test_env) }}, expectation = handle_expectation, packageNotFoundError = function(e) { new_expectations <- the$test_expectations > starting_expectations if (on_cran()) { if (snapshot_skipped) { skip(paste0("{", e$package, "} is not installed.")) skip("On CRAN") } }}, snapshot_on_cran = function(cnd) { else if (!new_expectations && skip_on_empty) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") skip_empty()}, skip = handle_skip, warning = handle_warning, message = handle_message, }}, expectation = handle_expectation, packageNotFoundError = function(e) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal), if (on_cran()) { end_test = function() { skip(paste0("{", e$package, "} is not installed.")) }) }
}, snapshot_on_cran = function(cnd) {37: snapshot_skipped <<- TRUEtest_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new()) invokeRestart("muffle_cran_snapshot")
38: }, skip = handle_skip, warning = handle_warning, message = handle_message, source_file(path, env = env(env), desc = desc, shuffle = shuffle, error = handle_error, interrupt = handle_interrupt), error = handle_fatal) error_call = error_call)
39: 34: FUN(X[[i]], ...)doWithOneRestart(return(expr), restart)
40:
lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)35:
41: withOneRestart(expr, restarts[[1L]])doTryCatch(return(expr), name, parentenv, handler)
36: 42: withRestarts(tryCatch(withCallingHandlers({tryCatchOne(expr, names, parentenv, handlers[[1L]])
eval(code, test_env)43: new_expectations <- the$test_expectations > starting_expectationstryCatchList(expr, classes, parentenv, handlers) if (snapshot_skipped) {
skip("On CRAN")44: }tryCatch(code, testthat_abort_reporter = function(cnd) { else if (!new_expectations && skip_on_empty) { cat(conditionMessage(cnd), "\n") skip_empty() NULL }})
}, expectation = handle_expectation, packageNotFoundError = function(e) {45: if (on_cran()) {with_reporter(reporters$multi, lapply(test_paths, test_one_file, skip(paste0("{", e$package, "} is not installed.")) env = env, desc = desc, shuffle = shuffle, error_call = error_call)) }
}, snapshot_on_cran = function(cnd) {46: snapshot_skipped <<- TRUEtest_files_serial(test_dir = test_dir, test_package = test_package, invokeRestart("muffle_cran_snapshot") test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, }, skip = handle_skip, warning = handle_warning, message = handle_message, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), desc = desc, load_package = load_package, shuffle = shuffle, end_test = function() { error_call = error_call) })
47: 37: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, test_code(code = exprs, env = env, reporter = get_reporter() %||% stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, StopReporter$new()) load_package = load_package, parallel = parallel, shuffle = shuffle)
38: 48: source_file(path, env = env(env), desc = desc, shuffle = shuffle, test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed") error_call = error_call)
49: 39: test_check("FCO")FUN(X[[i]], ...)
An irrecoverable exception occurred. R is aborting now ...
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend-34.R
Saving _problems/test-recommend-56.R
Saving _problems/test-recommend-69.R
Saving _problems/test-recommend-94.R
Saving _problems/test-recommend-112.R
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed."))
*** caught segfault ***
}address 0x110, cause 'invalid permissions'
}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod, free1 = free, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Constraining is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) {
Traceback:
if (identical(call[[1L]], quote(doTryCatch))) 1: call <- sys.call(-4L)lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) dcall <- deparse(call, nlines = 1L)
prefix <- paste("Error in", dcall, ": ") 2: LONG <- 75Llav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, sm <- strsplit(conditionMessage(e), "\n")[[1L]] fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, if (is.na(w)) unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], sampling_weights_type = swt_type) type = "b")
if (w > LONG) 3: prefix <- paste0(prefix, "\n ")lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, } wls_v = wls_v, nacov = nacov) else prefix <- "Error : "
msg <- paste0(prefix, conditionMessage(e), "\n") 4: .Internal(seterrmessage(msg[1L]))lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, if (!silent && isTRUE(getOption("show.error.messages"))) { lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, cat(msg, file = outFile) .Internal(printDeferredWarnings()) ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) }
invisible(structure(msg, class = "try-error", condition = e)) 5: })lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE,
std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
std.lv = TRUE, warn = FALSE), silent = TRUE) 6:
eval(sc, parent.frame())14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
7: 15: eval(sc, parent.frame())FUN(X[[i]], ...)
8: 16: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, lapply(X = S, FUN = FUN, ...) std.lv = TRUE, warn = FALSE)
17: 9: doTryCatch(return(expr), name, parentenv, handler)doTryCatch(return(expr), name, parentenv, handler)
18: 10: tryCatchOne(expr, names, parentenv, handlers[[1L]])tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: 11: tryCatchList(expr, classes, parentenv, handlers)tryCatchList(expr, classes, parentenv, handlers)
20:
tryCatch(expr, error = function(e) {12: call <- conditionCall(e)tryCatch(expr, error = function(e) { if (!is.null(call)) { call <- conditionCall(e) if (identical(call[[1L]], quote(doTryCatch))) if (!is.null(call)) { call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) if (identical(call[[1L]], quote(doTryCatch))) prefix <- paste("Error in", dcall, ": ") call <- sys.call(-4L) LONG <- 75L dcall <- deparse(call, nlines = 1L) sm <- strsplit(conditionMessage(e), "\n")[[1L]] prefix <- paste("Error in", dcall, ": ") w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") LONG <- 75L if (is.na(w)) sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (w > LONG) if (is.na(w)) prefix <- paste0(prefix, "\n ") w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], } type = "b") else prefix <- "Error : " if (w > LONG) msg <- paste0(prefix, conditionMessage(e), "\n") prefix <- paste0(prefix, "\n ") .Internal(seterrmessage(msg[1L])) } else prefix <- "Error : " if (!silent && isTRUE(getOption("show.error.messages"))) { msg <- paste0(prefix, conditionMessage(e), "\n") cat(msg, file = outFile) .Internal(seterrmessage(msg[1L])) .Internal(printDeferredWarnings()) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) } .Internal(printDeferredWarnings()) invisible(structure(msg, class = "try-error", condition = e)) }})
invisible(structure(msg, class = "try-error", condition = e))21: })try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
13: 22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE,
std.lv = TRUE, warn = FALSE), silent = TRUE)23:
FUN(X[[i]], ...)14:
generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, 24: free1 = free1, free2 = free2, s = s, k = k, nf = nf)lapply(seq_len(cores), inner.do)
15: 25: FUN(X[[i]], ...)
parallel::mclapply(1:rep, function(r) {16: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, lapply(X = S, FUN = FUN, ...) free1 = free1, free2 = free2, s = s, k = k, nf = nf)
}, mc.cores = cores)17:
doTryCatch(return(expr), name, parentenv, handler)26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4",
"F5"), dv.cutoff = 0.9)18:
tryCatchOne(expr, names, parentenv, handlers[[1L]])27:
eval(code, test_env)19:
tryCatchList(expr, classes, parentenv, handlers)28:
eval(code, test_env)
20: 29: tryCatch(expr, error = function(e) {withCallingHandlers({ call <- conditionCall(e) if (!is.null(call)) { eval(code, test_env) if (identical(call[[1L]], quote(doTryCatch))) new_expectations <- the$test_expectations > starting_expectations call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) if (snapshot_skipped) { skip("On CRAN") prefix <- paste("Error in", dcall, ": ") } LONG <- 75L else if (!new_expectations && skip_on_empty) { skip_empty() sm <- strsplit(conditionMessage(e), "\n")[[1L]] } w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w")}, expectation = handle_expectation, packageNotFoundError = function(e) { if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], if (on_cran()) { type = "b") skip(paste0("{", e$package, "} is not installed.")) if (w > LONG) prefix <- paste0(prefix, "\n ") } }}, snapshot_on_cran = function(cnd) { else prefix <- "Error : " snapshot_skipped <<- TRUE msg <- paste0(prefix, conditionMessage(e), "\n") invokeRestart("muffle_cran_snapshot") .Internal(seterrmessage(msg[1L]))}, skip = handle_skip, warning = handle_warning, message = handle_message, if (!silent && isTRUE(getOption("show.error.messages"))) { error = handle_error, interrupt = handle_interrupt) cat(msg, file = outFile) .Internal(printDeferredWarnings())
}30: invisible(structure(msg, class = "try-error", condition = e))doTryCatch(return(expr), name, parentenv, handler)})
31:
tryCatchOne(expr, names, parentenv, handlers[[1L]])21:
32: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)tryCatchList(expr, classes, parentenv, handlers)
22: 33: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))tryCatch(withCallingHandlers({
eval(code, test_env)23: new_expectations <- the$test_expectations > starting_expectationsFUN(X[[i]], ...) if (snapshot_skipped) {
skip("On CRAN")24: }lapply(seq_len(cores), inner.do) else if (!new_expectations && skip_on_empty) { skip_empty()
}25: parallel::mclapply(1:rep, function(r) {}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, skip(paste0("{", e$package, "} is not installed.")) free1 = free1, free2 = free2, s = s, k = k, nf = nf) }}, mc.cores = cores)}, snapshot_on_cran = function(cnd) {
snapshot_skipped <<- TRUE26: invokeRestart("muffle_cran_snapshot")gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", }, skip = handle_skip, warning = handle_warning, message = handle_message, "F5"), dv.cutoff = 0.9) error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
27: 34: eval(code, test_env)doWithOneRestart(return(expr), restart)
35: 28: withOneRestart(expr, restarts[[1L]])eval(code, test_env)
36:
withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env)29: new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) {withCallingHandlers({ skip("On CRAN") eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations else if (!new_expectations && skip_on_empty) { if (snapshot_skipped) { skip_empty() skip("On CRAN") } }}, expectation = handle_expectation, packageNotFoundError = function(e) { else if (!new_expectations && skip_on_empty) { if (on_cran()) { skip_empty() skip(paste0("{", e$package, "} is not installed.")) } }}, expectation = handle_expectation, packageNotFoundError = function(e) {}, snapshot_on_cran = function(cnd) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot") }}, skip = handle_skip, warning = handle_warning, message = handle_message, }, snapshot_on_cran = function(cnd) { error = handle_error, interrupt = handle_interrupt), error = handle_fatal), snapshot_skipped <<- TRUE end_test = function() { invokeRestart("muffle_cran_snapshot") })}, skip = handle_skip, warning = handle_warning, message = handle_message,
error = handle_error, interrupt = handle_interrupt)37:
test_code(code = exprs, env = env, reporter = get_reporter() %||% 30: doTryCatch(return(expr), name, parentenv, handler) StopReporter$new())
38: 31: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
tryCatchOne(expr, names, parentenv, handlers[[1L]])39:
FUN(X[[i]], ...)
40: 32: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)tryCatchList(expr, classes, parentenv, handlers)
41: doTryCatch(return(expr), name, parentenv, handler)
33: 42: tryCatch(withCallingHandlers({tryCatchOne(expr, names, parentenv, handlers[[1L]]) eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
43: tryCatchList(expr, classes, parentenv, handlers) if (snapshot_skipped) {
skip("On CRAN")44: }tryCatch(code, testthat_abort_reporter = function(cnd) { else if (!new_expectations && skip_on_empty) { cat(conditionMessage(cnd), "\n") skip_empty() NULL}) }
}, expectation = handle_expectation, packageNotFoundError = function(e) {45: if (on_cran()) {with_reporter(reporters$multi, lapply(test_paths, test_one_file, skip(paste0("{", e$package, "} is not installed.")) env = env, desc = desc, shuffle = shuffle, error_call = error_call)) }
}, snapshot_on_cran = function(cnd) {46: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, }, skip = handle_skip, warning = handle_warning, message = handle_message, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, error = handle_error, interrupt = handle_interrupt), error = handle_fatal) desc = desc, load_package = load_package, shuffle = shuffle,
error_call = error_call)34:
doWithOneRestart(return(expr), restart)47:
test_files(test_dir = path, test_paths = test_paths, test_package = package, 35: withOneRestart(expr, restarts[[1L]]) reporter = reporter, load_helpers = load_helpers, env = env,
stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, 36: load_package = load_package, parallel = parallel, shuffle = shuffle)withRestarts(tryCatch(withCallingHandlers({
eval(code, test_env)48: new_expectations <- the$test_expectations > starting_expectationstest_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed") if (snapshot_skipped) {
skip("On CRAN")49: }test_check("FCO") else if (!new_expectations && skip_on_empty) {
skip_empty() }An irrecoverable exception occurred. R is aborting now ...
}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Merging is selected as the discriminant validity testing option given the provided arguments.
*** caught segfault ***
address 0x110, cause 'invalid permissions'
*** caught segfault ***
address 0x110, cause 'invalid permissions'
Traceback:
1: lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n)
2: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one, unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], sampling_weights_type = swt_type)
3: lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov)
4: lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable)
5: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
6: eval(sc, parent.frame())
7: eval(sc, parent.frame())
8: lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE)
9: doTryCatch(return(expr), name, parentenv, handler)
10: tryCatchOne(expr, names, parentenv, handlers[[1L]])
11: tryCatchList(expr, classes, parentenv, handlers)
12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal),
Traceback:
1: end_test = function() {lav_samp_gamma_meat(zc, cluster_idx = cluster_idx, n = n) })
2: 37: lav_samp_gamma(m_y = y, x_idx = x_idx[[g]], cluster_idx = cluster_idx, test_code(code = exprs, env = env, reporter = get_reporter() %||% fixed_x = fixed_x, conditional_x = conditional_x, meanstructure = meanstructure, StopReporter$new()) slopestructure = conditional_x, gamma_n_minus_one = gamma_recipe$n.minus.one,
unbiased = gamma_recipe$unbiased, mplus_wls = FALSE, wt = wt[[g]], 38: sampling_weights_type = swt_type)source_file(path, env = env(env), desc = desc, shuffle = shuffle,
error_call = error_call) 3:
lav_samp_from_data(lavdata = lavdata, lavoptions = lavoptions, 39: wls_v = wls_v, nacov = nacov)
FUN(X[[i]], ...) 4:
lav_step05_samp(slot_sample_stats = slot_sample_stats, lavdata = lavdata, lavoptions = lavoptions, wls_v = wls_v, nacov = nacov, sample_cov = sample_cov, 40: sample_mean = sample_mean, sample_th = sample_th, sample_nobs = sample_nobs, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, ov_names = ov_names, ov_names_x = ov_names_x, lavpartable = lavpartable) error_call = error_call)
5: 41: lavaan::lavaan(free1, y, estimator = "MLM", auto.fix.first = FALSE, doTryCatch(return(expr), name, parentenv, handler) std.lv = TRUE, warn = FALSE, model.type = "cfa", cmd = "cfa")
42: 6: tryCatchOne(expr, names, parentenv, handlers[[1L]])eval(sc, parent.frame())
43: 7: tryCatchList(expr, classes, parentenv, handlers)eval(sc, parent.frame())
44:
tryCatch(code, testthat_abort_reporter = function(cnd) { 8: cat(conditionMessage(cnd), "\n")lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, NULL std.lv = TRUE, warn = FALSE)})
9: 45: doTryCatch(return(expr), name, parentenv, handler)with_reporter(reporters$multi, lapply(test_paths, test_one_file,
env = env, desc = desc, shuffle = shuffle, error_call = error_call))10:
tryCatchOne(expr, names, parentenv, handlers[[1L]])46:
test_files_serial(test_dir = test_dir, test_package = test_package, 11: test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, tryCatchList(expr, classes, parentenv, handlers) env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning,
desc = desc, load_package = load_package, shuffle = shuffle, 12: error_call = error_call)tryCatch(expr, error = function(e) {
call <- conditionCall(e)47: if (!is.null(call)) {test_files(test_dir = path, test_paths = test_paths, test_package = package, if (identical(call[[1L]], quote(doTryCatch))) reporter = reporter, load_helpers = load_helpers, env = env, call <- sys.call(-4L) stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, dcall <- deparse(call, nlines = 1L) load_package = load_package, parallel = parallel, shuffle = shuffle) prefix <- paste("Error in", dcall, ": ")
LONG <- 75L48: sm <- strsplit(conditionMessage(e), "\n")[[1L]]test_dir("testthat", package = package, reporter = reporter, w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") ..., load_package = "installed") if (is.na(w))
w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], 49: type = "b")test_check("FCO") if (w > LONG)
prefix <- paste0(prefix, "\n ")An irrecoverable exception occurred. R is aborting now ...
} else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
13: try(lavaan::cfa(free1, y, estimator = "MLM", auto.fix.first = FALSE, std.lv = TRUE, warn = FALSE), silent = TRUE)
14: generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)
15: FUN(X[[i]], ...)
16: lapply(X = S, FUN = FUN, ...)
17: doTryCatch(return(expr), name, parentenv, handler)
18: tryCatchOne(expr, names, parentenv, handlers[[1L]])
19: tryCatchList(expr, classes, parentenv, handlers)
20: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
21: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
22: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
23: FUN(X[[i]], ...)
24: lapply(seq_len(cores), inner.do)
25: parallel::mclapply(1:rep, function(r) { generator(x = x, n = n, seed = seeds[r], mode = mode, pop.mod1 = pop.mod1, free1 = free1, free2 = free2, s = s, k = k, nf = nf)}, mc.cores = cores)
26: gen_fit(mod1 = mod, x = bb1992, rep = 10, dv = TRUE, dv.factors = c("F4", "F5"), merge.mod = TRUE)
27: eval(code, test_env)
28: eval(code, test_env)
29: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
30: doTryCatch(return(expr), name, parentenv, handler)
31: tryCatchOne(expr, names, parentenv, handlers[[1L]])
32: tryCatchList(expr, classes, parentenv, handlers)
33: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
34: doWithOneRestart(return(expr), restart)
35: withOneRestart(expr, restarts[[1L]])
36: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
37: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
38: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
39: FUN(X[[i]], ...)
40: lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call)
41: doTryCatch(return(expr), name, parentenv, handler)
42: tryCatchOne(expr, names, parentenv, handlers[[1L]])
43: tryCatchList(expr, classes, parentenv, handlers)
44: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
45: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, shuffle = shuffle, error_call = error_call))
46: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, shuffle = shuffle, error_call = error_call)
47: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel, shuffle = shuffle)
48: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed")
49: test_check("FCO")
An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test-recommend_dv-43.R
Saving _problems/test-recommend_dv-51.R
Saving _problems/test-recommend_dv-59.R
Saving _problems/test-recommend_dv-68.R
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-recommend.R:29:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #1 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:29:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:51:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #3 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:51:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:62:13'): Are the settings for purpose and focus following the recommendations by Mai et al.? #4 ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:62:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:86:13'): Is the result rounded properly? ───────────
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:86:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend.R:104:13'): Are the indices properly used when override is TRUE? ──
<subscriptOutOfBoundsError/error/condition>
Error in `fits.nna[[1]]`: subscript out of bounds
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend.R:104:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend(...)
4. ├─base::suppressWarnings(lapply(ap, flex_co, fits = fits, index = index))
5. │ └─base::withCallingHandlers(...)
6. └─base::lapply(ap, flex_co, fits = fits, index = index)
7. └─FCO (local) FUN(X[[i]], ...)
8. └─index %in% names(fits.nna[[1]])
── Error ('test-recommend_dv.R:40:13'): Are multiple fit indices supported? ────
Error in `recommend_dv(fits = fits.dv.merge, index = c("CFI", "SRMR", "GFI"))`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(...) at test-recommend_dv.R:40:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(...)
── Error ('test-recommend_dv.R:49:13'): Is the proper dv technique used? merging? ──
Error in `recommend_dv(fits = fits.dv.merge, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.merge, )) at test-recommend_dv.R:49:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.merge, )
── Error ('test-recommend_dv.R:57:13'): Is the proper dv technique used? constraining? ──
Error in `recommend_dv(fits = fits.dv.con, )`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, )) at test-recommend_dv.R:57:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, )
── Error ('test-recommend_dv.R:65:13'): Is the result rounded properly? ────────
Error in `recommend_dv(fits = fits.dv.con, digits = 5)`: Only dual model fit indices are supported so far for this function. Please revise or use flex_co.
Backtrace:
▆
1. ├─base::suppressWarnings(recommend_dv(fits = fits.dv.con, digits = 5)) at test-recommend_dv.R:65:13
2. │ └─base::withCallingHandlers(...)
3. └─FCO::recommend_dv(fits = fits.dv.con, digits = 5)
[ FAIL 9 | WARN 8 | SKIP 0 | PASS 65 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64