Last updated on 2025-02-11 01:49:08 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.7 | 69.29 | 268.99 | 338.28 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.1.7 | 51.72 | 189.49 | 241.21 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.1.7 | 596.80 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.7 | 584.02 | NOTE | |||
| r-devel-windows-x86_64 | 2.1.7 | 84.00 | 286.00 | 370.00 | NOTE | |
| r-patched-linux-x86_64 | 2.1.7 | 73.10 | 264.13 | 337.23 | ERROR | |
| r-release-linux-x86_64 | 2.1.7 | 74.10 | 269.60 | 343.70 | NOTE | |
| r-release-macos-arm64 | 2.1.7 | 81.00 | NOTE | |||
| r-release-macos-x86_64 | 2.1.7 | 149.00 | NOTE | |||
| r-release-windows-x86_64 | 2.1.7 | 83.00 | 287.00 | 370.00 | NOTE | |
| r-oldrel-macos-arm64 | 2.1.7 | 159.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 2.1.7 | 283.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 2.1.7 | 98.00 | 351.00 | 449.00 | NOTE |
Version: 2.1.7
Check: C++ specification
Result: NOTE
Specified C++14: please drop specification unless essential
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 2.1.7
Check: Rd files
Result: NOTE
checkRd: (-1) simulate_admixture.Rd:36: Lost braces
36 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
checkRd: (-1) simulate_ancestry.Rd:49: Lost braces
49 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
checkRd: (-1) simulate_ancestry_migration.Rd:59: Lost braces
59 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
checkRd: (-1) simulate_sequence.Rd:51: Lost braces
51 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
checkRd: (-1) simulate_sequence_migration.Rd:58: Lost braces
58 | \code{location}{ location of the marker under selection (in Morgan) }
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 2.1.7
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘methods’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 2.1.7
Check: tests
Result: ERROR
Running ‘testthat.R’ [94s/116s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(GenomeAdmixR) # nolint
>
> test_check("GenomeAdmixR")
|
| | 0%
|
|=================================== | 50%
|
|======================================================================| 100%[ FAIL 1 | WARN 0 | SKIP 0 | PASS 454 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-simulate_admixture_data.R:202:3'): simulate_admixture_data_recombination_map ──
`all_j` not equal to `expected_num_j`.
1/1 mismatches
[1] 70 - 100 == -30
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 454 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64
Version: 2.1.7
Check: installed package size
Result: NOTE
installed size is 6.8Mb
sub-directories of 1Mb or more:
doc 2.0Mb
libs 4.3Mb
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64