Last updated on 2025-11-14 01:51:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.3 | 5.32 | 65.94 | 71.26 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.3 | 3.76 | 48.97 | 52.73 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.3 | 11.00 | 97.09 | 108.09 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 0.1.3 | 22.00 | 106.24 | 128.24 | ERROR | |
| r-devel-windows-x86_64 | 0.1.3 | 7.00 | 91.00 | 98.00 | OK | |
| r-patched-linux-x86_64 | 0.1.3 | 5.04 | 61.97 | 67.01 | OK | |
| r-release-linux-x86_64 | 0.1.3 | 4.78 | 62.41 | 67.19 | OK | |
| r-release-macos-arm64 | 0.1.3 | 2.00 | 39.00 | 41.00 | OK | |
| r-release-macos-x86_64 | 0.1.3 | 4.00 | 75.00 | 79.00 | OK | |
| r-release-windows-x86_64 | 0.1.3 | 7.00 | 89.00 | 96.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.3 | 2.00 | 44.00 | 46.00 | OK | |
| r-oldrel-macos-x86_64 | 0.1.3 | 4.00 | 76.00 | 80.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.3 | 9.00 | 108.00 | 117.00 | OK |
Version: 0.1.3
Check: tests
Result: ERROR
Running ‘spelling.R’
Running ‘testthat.R’ [26s/45s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(SIAtools)
>
> test_check("SIAtools")
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6155e6414'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61f833b32'...
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61d463d6e'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc612db78562'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc612db78562'...
i Adding Config/ShinyItemAnalysis/module: true to 'DESCRIPTION'.
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc616661443c'...
i Adding Config/ShinyItemAnalysis/module: true to 'DESCRIPTION'.
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc613ea09338'...
i Adding Config/ShinyItemAnalysis/module: true to 'DESCRIPTION'.
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6172ab03bf'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61221b3206'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61615fd66a'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61615fd66a'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6147176253'...
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6147176253'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61507970c7'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61507970c7'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6145882788'...
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> Edit the title of your module in the YAML.
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6145882788'...
! This package doesn't declare that it contains any SIA modules (there is no line reading Config/ShinyItemAnalysis/module: true in the 'DESCRIPTION').
i Trying to obtain and read SIA Modules Manifest nevertheless...
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61e252b18'...
i Adding Config/ShinyItemAnalysis/module: true to 'DESCRIPTION'.
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6138e67e6d'...
i Adding Config/ShinyItemAnalysis/module: true to 'DESCRIPTION'.
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test1.R' file with your new module has been created. You can write your code here.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test2.R' file with your new module has been created. You can write your code here.
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc616c44e32c'...
! This package doesn't declare that it contains any SIA modules (there is no line reading Config/ShinyItemAnalysis/module: true in the 'DESCRIPTION').
i Trying to obtain and read SIA Modules Manifest nevertheless...
! This package doesn't declare that it contains any SIA modules (there is no line reading Config/ShinyItemAnalysis/module: true in the 'DESCRIPTION').
i Trying to obtain and read SIA Modules Manifest nevertheless...
! This package doesn't declare that it contains any SIA modules (there is no line reading Config/ShinyItemAnalysis/module: true in the 'DESCRIPTION').
i Trying to obtain and read SIA Modules Manifest nevertheless...
x The SIA Modules Manifest file at 'inst/sia/modules.yml' is corrupt (not a list).
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6130a1af32'...
i Adding Config/ShinyItemAnalysis/module: true to 'DESCRIPTION'.
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
# A tibble: 1 x 5
module_id title category binding_ui binding_server
<chr> <chr> <chr> <chr> <chr>
1 sm_test CHANGE THIS TO YOUR MODULE'S TIT~ Scores ~ sm_test_ui sm_test_server
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc615b6b777f'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61365ae5a'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61365ae5a'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6114bb940f'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6114bb940f'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc615386f044'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc615386f044'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6158f5cf8'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6158f5cf8'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6118d2515a'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6118d2515a'...
i Setting working directory to '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc613f21c9e3'...
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc613f21c9e3'...
i Adding Config/ShinyItemAnalysis/module: true to 'DESCRIPTION'.
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
Writing 'NAMESPACE'
i Loading file24cc6123a6a1b3
x sm_test.R:25: @description Could not resolve link to topic "sm_test" in the dependencies or base packages.
i If you haven't documented "sm_test" yet, or just changed its name, this is normal. Once "sm_test" is documented, this warning goes away.
i Make sure that the name of the topic is spelled correctly.
i Always list the linked package as a dependency.
i Alternatively, you can fully qualify the link with a package name.
Writing 'sm_test.Rd'
Writing 'sm_test_internal.Rd'
i Loading file24cc6123a6a1b3
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc6123a6a1b3'...
i Adding Config/ShinyItemAnalysis/module: true to 'DESCRIPTION'.
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
Writing 'NAMESPACE'
i Loading file24cc614852b389
x sm_test.R:25: @description Could not resolve link to topic "sm_test" in the dependencies or base packages.
i If you haven't documented "sm_test" yet, or just changed its name, this is normal. Once "sm_test" is documented, this warning goes away.
i Make sure that the name of the topic is spelled correctly.
i Always list the linked package as a dependency.
i Alternatively, you can fully qualify the link with a package name.
Writing 'sm_test.Rd'
Writing 'sm_test_internal.Rd'
i Loading file24cc614852b389
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc614852b389'...
i Adding Config/ShinyItemAnalysis/module: true to 'DESCRIPTION'.
x There is no SIA Modules Manifest file at 'inst/sia/modules.yml'
i Creating a new one.
> 'inst/sia/modules.yml' YAML file with the SIA Modules Manifest has been created. Please inspect and edit.
> 'R/sm_test.R' file with your new module has been created. You can write your code here.
> Edit the title of your module in the YAML.
> Chose a category from the options listed in the YAML.
v Restoring original working directory to '/data/gannet/ripley/R/packages/tests-devel/SIAtools.Rcheck/tests/testthat'...
v Setting active project to "<no active project>".
v Deleting temporary project at '/tmp/Rtmp3LjqKT/working_dir/RtmpkgJCZC/file24cc61473349fa'...
[ FAIL 1 | WARN 0 | SKIP 4 | PASS 65 ]
══ Skipped tests (4) ═══════════════════════════════════════════════════════════
• On CRAN (4): 'test-add_module.R:33:1', 'test-add_module.R:66:1',
'test-add_module.R:73:1', 'test-add_module.R:92:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-get_modules.R:76:3'): manifest prints out correctly ────────────
Error in `parse(text = x)`: <text>:5:19: unexpected symbol
4: sm_test:
5: title: CHANGE THIS
^
Backtrace:
▆
1. ├─get_modules() %>% print(as_tibble = TRUE) %>% ... at test-get_modules.R:76:3
2. └─testthat::expect_snapshot_value(., style = "deparse", cran = TRUE)
3. └─testthat:::expect_snapshot_helper(...)
4. └─snapshotter$take_snapshot(...)
5. └─testthat (local) load(old_raw)
6. └─testthat:::reparse(x)
7. ├─base::eval(parse(text = x), env)
8. └─base::parse(text = x)
[ FAIL 1 | WARN 0 | SKIP 4 | PASS 65 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc