Last updated on 2024-11-09 02:49:15 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| bzinb | 13 | ||
| icrf | 1 | 9 | 3 |
Current CRAN status: OK: 13
Current CRAN status: ERROR: 1, NOTE: 9, OK: 3
Version: 2.0.2
Check: Rd files
Result: NOTE
checkRd: (-1) getTree.icrf.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) getTree.icrf.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) getTree.icrf.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) getTree.icrf.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) getTree.icrf.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) getTree.icrf.Rd:31-33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:169: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:170-172: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:171: Lost braces
171 | \item{quasihonest}, \code{bandwith}, and the subsample ratio
| ^
checkRd: (-1) icrf.Rd:173-174: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:175-176: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:177-178: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:179: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:180-181: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:182-183: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:184-185: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:186: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:187-190: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:191-193: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:194: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:195: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:196: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:197-198: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:199: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:199: Lost braces; missing escapes or markup?
199 | \item{intervals}{\code{n} by {2} matrix of the intervals.}
| ^
checkRd: (-1) icrf.Rd:200-213: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) icrf.Rd:200-203: Lost braces
200 | \item{proximity}{if \code{proximity=TRUE} {if \code{proximity=TRUE} when
| ^
checkRd: (-1) icrf.Rd:204: Lost braces
204 | \item{inbag}{if \code{keep.inbag=TRUE} provides a matrix of in-bag indicators
| ^
checkRd: (-1) icrf.Rd:204-205: Lost braces
204 | \item{inbag}{if \code{keep.inbag=TRUE} provides a matrix of in-bag indicators
| ^
checkRd: (-1) icrf.Rd:206: Lost braces
206 | \item{runtime}{start and end times and the elapsed time.}
| ^
checkRd: (-1) icrf.Rd:206: Lost braces
206 | \item{runtime}{start and end times and the elapsed time.}
| ^
checkRd: (-1) icrf.Rd:207: Lost braces
207 | \item{test}{if test set is given (through the \code{xtest} or additionally
| ^
checkRd: (-1) icrf.Rd:207-212: Lost braces
207 | \item{test}{if test set is given (through the \code{xtest} or additionally
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 2.0.2
Check: examples
Result: ERROR
Running examples in ‘icrf-Ex.R’ failed
The error most likely occurred in:
> ### Name: measure
> ### Title: Prediction error measures
> ### Aliases: measure
>
> ### ** Examples
>
> # rats data example.
> # Note that this is a toy example. Use a larger ntree and nfold in practice.
> library(survival) # for Surv()
> data(rat2)
> L = ifelse(rat2$tumor, 0, rat2$survtime)
> R = ifelse(rat2$tumor, rat2$survtime, Inf)
> ## Don't show:
> set.seed(2)
>
> rats.icrf <-
+ icrf(Surv(L, R, type = "interval2") ~ dose.lvl + weight + male + cage.no,
+ data = rat2, ntree = 2, nfold = 2)
Forest loop 1 out of 2 folds
Tree 1 2
IMSE1 (OOB, non-OOB) = (0.121, 0.077), IMSE2 = (0.260, 0.208)
Forest loop 2 out of 2 folds
Tree 1 2
IMSE1 (OOB, non-OOB) = (0.117, 0.083), IMSE2 = (0.234, 0.188)
>
> measure(rats.icrf$predicted.Sm, timepoints = rats.icrf$time.points.smooth,
+ tau = rats.icrf$tau, method = "imse", L = L, R = R)
*** caught segfault ***
address 0x1, cause 'memory not mapped'
Traceback:
1: measure(rats.icrf$predicted.Sm, timepoints = rats.icrf$time.points.smooth, tau = rats.icrf$tau, method = "imse", L = L, R = R)
An irrecoverable exception occurred. R is aborting now ...
Flavor: r-devel-linux-x86_64-fedora-gcc