Last updated on 2025-10-29 01:51:12 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| gprofiler2 | 1 | 1 | 11 |
Current CRAN status: ERROR: 1, NOTE: 1, OK: 11
Version: 0.2.3
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Liis Kolberg <liis.kolberg@ut.ee>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = "Liis",
family = "Kolberg",
role = c("aut", "cre"),
email = "liis.kolberg@ut.ee"),
person(given = "Uku",
family = "Raudvere",
role = "aut",
email = "uku.raudvere@ut.ee"))
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.2.3
Check: examples
Result: ERROR
Running examples in ‘gprofiler2-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gostplot
> ### Title: Manhattan plot of functional enrichment results.
> ### Aliases: gostplot
>
> ### ** Examples
>
> gostres <- gost(c("Klf4", "Pax5", "Sox2", "Nanog"), organism = "mmusculus")
Error in gprofiler_request(url, body) :
There's an issue with your request to g:Profiler.
Error code: 503.
Please double check your input. If this doesn't help, then check your internet connection or contact us with a reproducible example on biit.support@ut.ee
Calls: gost -> <Anonymous> -> gprofiler_request
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘gprofiler2.Rmd’ using rmarkdown
Quitting from gprofiler2.Rmd:164-172 [unnamed-chunk-7]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `gprofiler_request()`:
! There's an issue with your request to g:Profiler.
Error code: 503.
Please double check your input. If this doesn't help, then check your internet connection or contact us with a reproducible example on biit.support@ut.ee
---
Backtrace:
▆
1. └─gprofiler2::gost(...)
2. └─gprofiler2::get_version_info(organism = organism)
3. └─gprofiler2:::gprofiler_request(url, body)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'gprofiler2.Rmd' failed with diagnostics:
There's an issue with your request to g:Profiler.
Error code: 503.
Please double check your input. If this doesn't help, then check your internet connection or contact us with a reproducible example on biit.support@ut.ee
--- failed re-building ‘gprofiler2.Rmd’
SUMMARY: processing the following file failed:
‘gprofiler2.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc