Last updated on 2025-07-30 02:53:59 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.58 | 252.26 | 264.84 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.66 | 217.19 | 227.85 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 306.52 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 369.96 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.69 | 261.54 | 276.23 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.10 | 257.90 | 272.00 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 155.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 205.00 | 225.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 166.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 237.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/105s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.526, system: 0.063, elapsed: 2.315 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.108, system: 0.186, elapsed: 13.292 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.015, elapsed: 0.258 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.615, system: 0.184, elapsed: 4.442 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.004, elapsed: 0.197 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.144, system: 0.481, elapsed: 21.287 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.438, system: 0.031, elapsed: 1.920 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.971, system: 0.066, elapsed: 12.153 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.013, elapsed: 0.293 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.718, system: 0.166, elapsed: 5.325 seconds]
Computing values for grid cells...
... done. [user: 0.161, system: 0.003, elapsed: 0.204 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.017, system: 0.300, elapsed: 20.647 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.550, system: 0.040, elapsed: 2.256 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.013, system: 0.054, elapsed: 12.886 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.011, elapsed: 0.309 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.678, system: 0.174, elapsed: 5.597 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.225 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.136, system: 0.213, elapsed: 1.096 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.361, system: 0.519, elapsed: 23.312 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.436, system: 0.028, elapsed: 2.091 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.993, system: 0.050, elapsed: 12.536 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.278 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.643, system: 0.168, elapsed: 5.250 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.229 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.144, system: 0.438, elapsed: 12.847 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.221, system: 0.729, elapsed: 34.193 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/115s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.040, elapsed: 2.287 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.923, system: 0.075, elapsed: 12.018 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.013, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.520, system: 0.175, elapsed: 5.328 seconds]
Computing values for grid cells...
... done. [user: 0.154, system: 0.003, elapsed: 0.205 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.865, system: 0.324, elapsed: 20.953 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.509, system: 0.033, elapsed: 2.050 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.954, system: 0.072, elapsed: 12.297 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.201 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.579, system: 0.155, elapsed: 3.936 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.002, elapsed: 0.170 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.956, system: 0.302, elapsed: 19.381 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.470, system: 0.026, elapsed: 1.562 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.055, system: 0.171, elapsed: 13.207 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.254 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.533, system: 0.210, elapsed: 4.830 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.006, elapsed: 0.218 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.066, system: 0.220, elapsed: 0.916 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.092, system: 0.689, elapsed: 21.809 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.457, system: 0.038, elapsed: 2.232 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.905, system: 0.045, elapsed: 19.713 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.389 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.582, system: 0.166, elapsed: 7.164 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.270 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.122, system: 0.458, elapsed: 15.570 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.050, system: 0.748, elapsed: 46.445 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64