Last updated on 2026-03-14 01:52:01 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.93 | 284.26 | 298.19 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.35 | 239.06 | 250.41 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 298.64 | 320.64 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 332.12 | 363.12 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 3.00 | 44.00 | 47.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 23.00 | 197.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.31 | 344.24 | 358.55 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.58 | 340.41 | 354.99 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 253.00 | 264.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 186.00 | 206.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 447.00 | 457.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 247.00 | 272.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [98s/210s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.550, system: 0.046, elapsed: 2.103 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.710, system: 0.064, elapsed: 14.101 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.017, elapsed: 0.944 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.781, system: 0.752, elapsed: 55.154 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.003, elapsed: 0.212 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.015, system: 0.909, elapsed: 73.354 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.520, system: 0.032, elapsed: 1.917 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.620, system: 0.068, elapsed: 11.261 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.213, system: 0.014, elapsed: 0.405 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.534, system: 0.639, elapsed: 17.164 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.007, elapsed: 0.193 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.631, system: 0.784, elapsed: 31.639 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.528, system: 0.031, elapsed: 1.988 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.549, system: 0.053, elapsed: 11.540 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.014, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.385, system: 0.594, elapsed: 7.561 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.003, elapsed: 0.185 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.285, system: 0.259, elapsed: 1.027 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.836, system: 0.995, elapsed: 23.329 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.543, system: 0.034, elapsed: 2.138 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.752, system: 0.057, elapsed: 12.118 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.015, elapsed: 0.747 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.649, system: 0.699, elapsed: 40.486 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.190 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.739, system: 0.629, elapsed: 18.539 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.807, system: 1.467, elapsed: 75.143 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/401s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.582, system: 0.045, elapsed: 1.793 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.490, system: 0.066, elapsed: 10.585 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.017, elapsed: 0.245 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.396, system: 0.675, elapsed: 36.976 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.180 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.445, system: 0.830, elapsed: 50.440 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.564, system: 0.032, elapsed: 2.073 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.575, system: 0.068, elapsed: 15.924 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.017, elapsed: 0.774 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.711, system: 0.814, elapsed: 102.229 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.349 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.809, system: 0.959, elapsed: 122.176 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.566, system: 0.032, elapsed: 3.115 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.530, system: 0.063, elapsed: 16.154 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.016, elapsed: 1.100 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.525, system: 0.703, elapsed: 67.002 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.002, elapsed: 0.176 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.237, system: 0.318, elapsed: 1.095 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.919, system: 1.161, elapsed: 89.626 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.539, system: 0.033, elapsed: 2.339 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.464, system: 0.047, elapsed: 20.652 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.015, elapsed: 1.174 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.495, system: 0.731, elapsed: 77.384 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.165 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 13.019, system: 0.818, elapsed: 28.994 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.648, system: 1.679, elapsed: 131.800 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64