Last updated on 2025-11-12 02:53:01 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.19 | 253.41 | 266.60 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.53 | 245.15 | 255.68 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 26.00 | 332.49 | 358.49 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 260.60 | 275.78 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.20 | 270.07 | 284.27 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 164.00 | 175.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 208.00 | 220.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 235.00 | 259.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/119s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.565, system: 0.043, elapsed: 2.308 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.599, system: 0.176, elapsed: 14.354 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.017, elapsed: 0.349 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.131, system: 0.287, elapsed: 6.107 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.171 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.213, system: 0.555, elapsed: 24.256 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.634, system: 0.069, elapsed: 2.486 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.645, system: 0.224, elapsed: 14.850 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.016, elapsed: 0.351 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.023, system: 0.231, elapsed: 5.852 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.007, elapsed: 0.266 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.220, system: 0.576, elapsed: 24.541 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.772, system: 0.065, elapsed: 2.447 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.694, system: 0.198, elapsed: 13.447 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.010, elapsed: 0.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.723, system: 0.162, elapsed: 4.032 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.185 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.145, system: 0.238, elapsed: 0.927 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.350, system: 0.706, elapsed: 22.060 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.816, system: 0.102, elapsed: 2.751 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.859, system: 0.270, elapsed: 12.289 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.020, elapsed: 0.309 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.243, system: 0.322, elapsed: 6.498 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.010, elapsed: 0.268 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.066, system: 0.686, elapsed: 16.751 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.035, system: 1.449, elapsed: 39.747 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/147s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.941, system: 0.122, elapsed: 3.680 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.882, system: 0.344, elapsed: 15.129 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.022, elapsed: 0.329 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.875, system: 0.258, elapsed: 6.226 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.008, elapsed: 0.283 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.652, system: 0.793, elapsed: 26.681 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.662, system: 0.050, elapsed: 2.752 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.552, system: 0.097, elapsed: 17.104 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.013, elapsed: 0.424 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.946, system: 0.199, elapsed: 7.879 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.006, elapsed: 0.369 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.115, system: 0.404, elapsed: 29.625 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.700, system: 0.051, elapsed: 3.637 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.518, system: 0.082, elapsed: 17.448 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.011, elapsed: 0.352 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.783, system: 0.174, elapsed: 6.674 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.339 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.156, system: 0.218, elapsed: 1.166 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.176, system: 0.577, elapsed: 30.772 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.558, system: 0.031, elapsed: 2.834 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.596, system: 0.072, elapsed: 16.263 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.393 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.753, system: 0.179, elapsed: 7.649 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.003, elapsed: 0.303 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.786, system: 0.494, elapsed: 21.421 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.722, system: 0.823, elapsed: 50.144 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64