Last updated on 2025-04-24 01:50:23 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.3.3 | 13.18 | 194.99 | 208.17 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.3.3 | 10.05 | 142.56 | 152.61 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.3.3 | 201.62 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.3.3 | 323.64 | OK | |||
| r-devel-windows-x86_64 | 1.3.3 | 14.00 | 173.00 | 187.00 | OK | |
| r-patched-linux-x86_64 | 1.3.3 | 12.50 | 185.22 | 197.72 | OK | |
| r-release-linux-x86_64 | 1.3.3 | 12.53 | 186.62 | 199.15 | OK | |
| r-release-macos-arm64 | 1.3.3 | 96.00 | OK | |||
| r-release-macos-x86_64 | 1.3.3 | 135.00 | OK | |||
| r-release-windows-x86_64 | 1.3.3 | 14.00 | 174.00 | 188.00 | OK | |
| r-oldrel-macos-arm64 | 1.3.3 | 86.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.3.3 | 142.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.3.3 | 20.00 | 232.00 | 252.00 | OK |
Version: 1.3.3
Check: tests
Result: ERROR
Running ‘testthat.R’ [11s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(viralmodels)
>
> test_check("viralmodels")
-- Attaching core tidyverse packages ------------------------ tidyverse 2.0.0 --
v dplyr 1.1.4 v readr 2.1.5
v forcats 1.0.0 v stringr 1.5.1
v ggplot2 3.5.2 v tibble 3.2.1
v lubridate 1.9.4 v tidyr 1.3.1
v purrr 1.0.4
-- Conflicts ------------------------------------------ tidyverse_conflicts() --
x readr::edition_get() masks testthat::edition_get()
x dplyr::filter() masks stats::filter()
x purrr::is_null() masks testthat::is_null()
x dplyr::lag() masks stats::lag()
x readr::local_edition() masks testthat::local_edition()
x dplyr::matches() masks tidyr::matches(), testthat::matches()
i Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errors
Loading required package: parsnip
Attaching package: 'kernlab'
The following object is masked from 'package:purrr':
cross
The following object is masked from 'package:ggplot2':
alpha
Loading required package: Matrix
Attaching package: 'Matrix'
The following objects are masked from 'package:tidyr':
expand, pack, unpack
Loaded glmnet 4.1-8
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-viralmodel.R:18:3'): `viralmodel()` works ──────────────────────
<packageNotFoundError/error/condition>
Error in `library(viraldomain)`: there is no package called 'viraldomain'
Backtrace:
▆
1. └─base::library(viraldomain) at test-viralmodel.R:18:3
── Error ('test-viralpreds.R:17:3'): viralpreds() works ────────────────────────
<packageNotFoundError/error/condition>
Error in `library(viraldomain)`: there is no package called 'viraldomain'
Backtrace:
▆
1. └─base::library(viraldomain) at test-viralpreds.R:17:3
── Error ('test-viraltab.R:17:3'): viraltab() works ────────────────────────────
<packageNotFoundError/error/condition>
Error in `library(viraldomain)`: there is no package called 'viraldomain'
Backtrace:
▆
1. └─base::library(viraldomain) at test-viraltab.R:17:3
── Error ('test-viralvis.R:18:3'): `viralvis()` plots as expected ──────────────
<packageNotFoundError/error/condition>
Error in `library(viraldomain)`: there is no package called 'viraldomain'
Backtrace:
▆
1. └─base::library(viraldomain) at test-viralvis.R:18:3
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 0 ]
Deleting unused snapshots:
• viralvis/viralvis.svg
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang