Maps Bone Densities from CT Scans to Surface Models

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Documentation for package ‘BoneDensityMapping’ version 0.1.1

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Package NEWS.

Help Pages

bone_scan_check	Check if surface model is fully contained within scan volume
color_bar	Produce stand alone color bar
color_mapping	maps numeric values to a color
color_mesh	Takes a density vector mapped to standardized coordinates and maps it to a surface mesh for visualization.
ct_calibration	Sigma beta CT calculations
fill_bone_points	Fills bone with orthogonally spaced points for internal analysis
import_lmks	import landmark coordinates
import_mesh	import surface mesh
import_scan	import CT scan
landmark_check	Check landmarks are close to the mesh
plot_cross_section_bone	Plot Cross-Sectional Bone Visualization in 3D
plot_mesh	plot mesh
reorientate_landmarks	Reorientate landmarks
rm_local_sig	local significance
surface_normal_intersect	Find material properties of bone at surface point using surface normal
surface_points_new	New mapped surface points from template
surface_points_template	Redefine surface points. Adds additional surface points (“sliders”) that are spatially distributed across the mesh surface. Adapted from geomorph
voxel_point_intersect	Finds material properties of bone at any point