Pedigree-based Relatedness Coefficients


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Documentation for package ‘ribd’ version 1.3.1

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condensedIdentity Condensed identity coefficients
condensedIdentityX Identity coefficients on X
constructPedigree Pedigree construction
external_coefs Relatedness coefficients by other programs
generalisedKinship Generalised kinship coefficients
generalisedKinship22 Karigl's generalised kinship coefficients
generalisedKinship3 Karigl's generalised kinship coefficients
generalisedKinship4 Karigl's generalised kinship coefficients
generalised_karigl Karigl's generalised kinship coefficients
ibdDraw Colourised IBD plot
ibdTriangle IBD triangle plot
idcoefs Relatedness coefficients by other programs
idcoefs2 Relatedness coefficients by other programs
inbreeding Inbreeding coefficients
inbreedingX Inbreeding coefficients
jicaque Jicaque pedigree
kappaIBD IBD (kappa) coefficients
kappaIbdX IBD (kappa) coefficients
kinPattern Generalised kinship pattern
kinship Kinship coefficients
kinship2_inbreeding Relatedness coefficients by other programs
kinship2_inbreedingX Relatedness coefficients by other programs
kinship2_kinship Relatedness coefficients by other programs
kinship2_kinshipX Relatedness coefficients by other programs
kinshipX Kinship coefficients
minimalPattern Minimal IBD pattern
multiPersonIBD Multi-person IBD coefficients
ribd ribd: Computation of pedigree-based relatedness coefficients
showInTriangle Add points to the IBD triangle
twoLocusIBD Two-locus IBD coefficients
twoLocusIdentity Two-locus identity coefficients
twoLocusKinship Two-locus kinship coefficients
twoLocusPlot Two-locus coefficient plot