do_BarPlot | Create Bar Plots. |
do_BeeSwarmPlot | BeeSwarm plot. |
do_BoxPlot | Generate Box Plots. |
do_CellularStatesPlot | Cellular States plot. |
do_ChordDiagramPlot | Generate a Chord diagram. |
do_ColorPalette | Generate color scales based on a value. |
do_CopyNumberVariantPlot | Display CNV scores from inferCNV as Feature Plots. |
do_CorrelationPlot | Create correlation matrix heatmaps. |
do_DimPlot | Wrapper for DimPlot. |
do_DotPlot | This function is a wrapper for DotPlot. It provides most of its functionalities while adding extra. You can |
do_EnrichmentHeatmap | Create enrichment scores heatmaps. |
do_FeaturePlot | Wrapper for FeaturePlot. |
do_GeyserPlot | Generate a Geyser plot. |
do_GroupwiseDEPlot | Compute a heatmap with the results of a group-wise DE analysis. |
do_NebulosaPlot | Wrapper for Nebulosa::plot_density in Seurat. |
do_PathwayActivityPlot | Plot Pathway Activities from decoupleR using Progeny prior knowledge. |
do_RidgePlot | Create ridge plots. |
do_TermEnrichmentPlot | Display the enriched terms for a given list of genes. |
do_TFActivityPlot | Plot TF Activities from decoupleR using Dorothea prior knowledge. |
do_ViolinPlot | Wrapper for VlnPlot. |
do_VolcanoPlot | Compute a Volcano plot out of DE genes. |
human_chr_locations | Chromosome arm locations for human genome GRCh38. |
state_dependencies | State SCpubr current function dependencies. |