Inferring an Animal's Sites of Interest from High Resolution Data

Documentation for package ‘SitesInterest’ version 1.0

Alt_Alg	Calculates the residence times and identifies the sites of interest
Alt_Alg_discont	Application of Alt_Alg to discontinuous data
Alt_Alg_mini	Calculates the residence times for circles taken from one trajectory, but applied to another
combining	Combines the residence times for the same set of circles and different trajectories
OU_14	Trajectory of an Ornstein-Uhlenbeck (OU) simulation.
plot.displacement	Plots the displacement from a particular point over a chosen window
plot.hoops	Plots the trajectory with sites of interest and other hoops
plot.schematic	Plots a schematic representation of the movement trajectory
plot_bars_and_hoops	Plots both the bar chart and hoops plot in one figure
plot_bar_chart	Plot the bar chart of residence times
plot_radii_results	Plots the results from using different radii
print.sites_pos	Prints the positions of the identified sites
print_colour_assignment	Prints a summary table of results from the different criteria
print_sites_pos	Prints the positions of the identified sites
print_site_visits	Prints the site visitation results
Sites	Finds the number of sites of interest from already calculated residence times