Generalized Additive Latent and Mixed Models

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Documentation for package ‘galamm’ version 0.4.0

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

anova.galamm	Compare likelihoods of galamm objects
appraise	Gratia style model diagnostic plots
appraise.galamm	Gratia style model diagnostic plots
coef.galamm	Extract galamm coefficients
cognition	Simulated Data with Measurements of Cognitive Abilities
confint.galamm	Confidence intervals for model parameters
derivatives	Derivatives of estimated smooth via finite differences
derivatives.galamm	Derivatives of estimated smooth via finite differences
deviance.galamm	Extract deviance of galamm object
diet	Diet Data
draw	Draw method for galamm objects
draw.galamm	Draw method for galamm objects
epilep	Epilepsy Data
extract_optim_parameters	Extract parameters from fitted model for use as initial values
extract_optim_parameters.galamm	Extract parameters from fitted model for use as initial values
factor_loadings	Extract factor loadings from galamm object
factor_loadings.galamm	Extract factor loadings from galamm object
family.galamm	Extract family or families from fitted galamm
fitted.galamm	Extract model fitted values
fixef	Extract fixed effects from galamm objects
fixef.galamm	Extract fixed effects from galamm objects
formula.galamm	Extract formula from fitted galamm object
galamm	Fit a generalized additive latent and mixed model
galammObject	Class "galamm"
galamm_control	Control values for galamm fit
gfam	Grouped families
hsced	Example Data with Heteroscedastic Residuals
latent_covariates	Simulated Data with Latent and Observed Covariates Interaction
latent_covariates_long	Simulated Longitudinal Data with Latent and Observed Covariates Interaction
lifespan	Simulated Dataset with Lifespan Trajectories of Three Cognitive Domains
logLik.galamm	Extract Log-Likelihood of galamm Object
model.frame.galamm	Extract the model frame from a galamm object
mresp	Simulated Mixed Response Data
mresp_hsced	Simulated Mixed Response Data with Heteroscedastic Residuals
nobs.galamm	Extract the Number of Observations from a galamm Fit
plot.galamm	Diagnostic plots for galamm objects
plot_smooth	Plot smooth terms for galamm fits
plot_smooth.galamm	Plot smooth terms for galamm fits
predict.galamm	Predictions from a model at new data values
print.galamm	Print method for GALAMM fits
print.summary.galamm	Print method for summary GALAMM fits
print.VarCorr.galamm	Print method for variance-covariance objects
qqmath	Quantile-quantile plots for galamm objects
qqmath.galamm	Quantile-quantile plots for galamm objects
ranef	Extract random effects from galamm object.
ranef.galamm	Extract random effects from galamm object.
residuals.galamm	Residuals of galamm objects
response	Extract response values
s	Set up smooth term with factor loading
sigma.galamm	Extract square root of dispersion parameter from galamm object
sl	Set up smooth term with factor loading
summary.galamm	Summarizing GALAMM fits
t2	Set up smooth term with factor loading
t2l	Set up smooth term with factor loading
VarCorr	Extract variance and correlation components from model
VarCorr.galamm	Extract variance and correlation components from model
vcov.galamm	Calculate variance-covariance matrix for GALAMM fit