Last updated on 2026-07-25 01:50:15 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 9.02 | 86.80 | 95.82 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 7.25 | 56.06 | 63.31 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 14.00 | 121.21 | 135.21 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 61.37 | ERROR | |||
| r-devel-windows-x86_64 | 1.0.0 | 12.00 | 87.00 | 99.00 | OK | |
| r-patched-linux-x86_64 | 1.0.0 | 8.98 | 78.24 | 87.22 | OK | |
| r-release-linux-x86_64 | 1.0.0 | 8.52 | 79.67 | 88.19 | OK | |
| r-release-macos-arm64 | 1.0.0 | 2.00 | 24.00 | 26.00 | OK | |
| r-release-macos-x86_64 | 1.0.0 | 6.00 | 179.00 | 185.00 | OK | |
| r-release-windows-x86_64 | 1.0.0 | 14.00 | 88.00 | 102.00 | OK | |
| r-oldrel-macos-arm64 | 1.0.0 | OK | ||||
| r-oldrel-macos-x86_64 | 1.0.0 | 5.00 | 79.00 | 84.00 | OK | |
| r-oldrel-windows-x86_64 | 1.0.0 | 14.00 | 111.00 | 125.00 | OK |
Version: 1.0.0
Check: DESCRIPTION meta-information
Result: NOTE
Author field differs from that derived from Authors@R
Author: ‘Marwan El Homsi [aut, cre, cph] (<https://orcid.org/0000-0002-5782-6757>, Desbrest Institute of Epidemiology and Public Health, Univ Montpellier, INSERM, Montpellier, France.), Isabella Annesi-Maesano [ctb, ths, fnd] (<https://orcid.org/0000-0002-6340-9300>, Desbrest Institute of Epidemiology and Public Health, Univ Montpellier, INSERM, Montpellier, France., Department of Allergic and Respiratory Diseases, Montpellier University Hospital, Montpellier.)’
Authors@R: ‘Marwan El Homsi [aut, cre, cph] (ORCID: <https://orcid.org/0000-0002-5782-6757>, affiliation: Desbrest Institute of Epidemiology and Public Health, Univ Montpellier, INSERM, Montpellier, France.), Isabella Annesi-Maesano [ctb, ths, fnd] (ORCID: <https://orcid.org/0000-0002-6340-9300>, affiliation1: Desbrest Institute of Epidemiology and Public Health, Univ Montpellier, INSERM, Montpellier, France., affiliation2: Department of Allergic and Respiratory Diseases, Montpellier University Hospital, Montpellier.)’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘Elja-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: ELJAglm
> ### Title: Generalized Linear Models regression for EnvWAS/EWAS analysis
> ### Aliases: ELJAglm
>
> ### ** Examples
>
> ### Loading the PIMA dataset contained in the mlbench package
>
> library(mlbench)
> data(PimaIndiansDiabetes)
Warning in data(PimaIndiansDiabetes) :
data set ‘PimaIndiansDiabetes’ not found
>
> ### Using ELJAlinear to perform EWAS analysis
>
> ELJAglm(var = 'diabetes',data = PimaIndiansDiabetes,
+ family = binomial(link = "logit"), manplot = TRUE, Bonferroni = TRUE,
+ FDR = TRUE, nbvalmanplot = 30, manplotsign = FALSE)
Error: object 'PimaIndiansDiabetes' not found
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Elja.Rmd’ using rmarkdown
Quitting from Elja.Rmd:63-67 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! object 'PimaIndiansDiabetes' not found
---
Backtrace:
▆
1. └─utils::head(PimaIndiansDiabetes)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Elja.Rmd' failed with diagnostics:
object 'PimaIndiansDiabetes' not found
--- failed re-building ‘Elja.Rmd’
SUMMARY: processing the following file failed:
‘Elja.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘Elja-Ex.R’ failed
The error most likely occurred in:
> ### Name: ELJAglm
> ### Title: Generalized Linear Models regression for EnvWAS/EWAS analysis
> ### Aliases: ELJAglm
>
> ### ** Examples
>
> ### Loading the PIMA dataset contained in the mlbench package
>
> library(mlbench)
> data(PimaIndiansDiabetes)
Warning in data(PimaIndiansDiabetes) :
data set ‘PimaIndiansDiabetes’ not found
>
> ### Using ELJAlinear to perform EWAS analysis
>
> ELJAglm(var = 'diabetes',data = PimaIndiansDiabetes,
+ family = binomial(link = "logit"), manplot = TRUE, Bonferroni = TRUE,
+ FDR = TRUE, nbvalmanplot = 30, manplotsign = FALSE)
Error: object 'PimaIndiansDiabetes' not found
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘Elja.Rmd’ using rmarkdown
Quitting from Elja.Rmd:63-67 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! object 'PimaIndiansDiabetes' not found
---
Backtrace:
▆
1. └─utils::head(PimaIndiansDiabetes)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Elja.Rmd' failed with diagnostics:
object 'PimaIndiansDiabetes' not found
--- failed re-building ‘Elja.Rmd’
SUMMARY: processing the following file failed:
‘Elja.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc