CRAN Package Check Results for Package ORscraper

Last updated on 2026-03-10 02:50:14 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.0 4.06 48.99 53.05 OK
r-devel-linux-x86_64-debian-gcc 0.1.0 3.43 38.93 42.36 ERROR
r-devel-linux-x86_64-fedora-clang 0.1.0 80.45 OK
r-devel-linux-x86_64-fedora-gcc 0.1.0 88.22 OK
r-devel-macos-arm64 0.1.0 1.00 22.00 23.00 ERROR
r-devel-windows-x86_64 0.1.0 8.00 66.00 74.00 ERROR
r-patched-linux-x86_64 0.1.0 4.15 44.07 48.22 OK
r-release-linux-x86_64 0.1.0 4.56 43.85 48.41 OK
r-release-macos-arm64 0.1.0 1.00 21.00 22.00 ERROR
r-release-macos-x86_64 0.1.0 3.00 63.00 66.00 ERROR
r-release-windows-x86_64 0.1.0 7.00 66.00 73.00 ERROR
r-oldrel-macos-arm64 0.1.0 1.00 27.00 28.00 ERROR
r-oldrel-macos-x86_64 0.1.0 3.00 66.00 69.00 ERROR
r-oldrel-windows-x86_64 0.1.0 8.00 79.00 87.00 ERROR

Check Details

Version: 0.1.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [2s/6s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_search_ncbi_clinvar-34.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_search_ncbi_clinvar.R:34:3'): search_ncbi_clinvar correctly retrieves pathogenicity information ── Expected `result` to equal `list(c("Pathogenic", "No results"))`. Differences: `actual[[1]]`: "Uncertain significance" "No results" `expected[[1]]`: "Pathogenic" "No results" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.1.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [1s/3s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_extract_chip_id-10.R Saving _problems/test_search_ncbi_clinvar-34.R [ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ── Expected `result` to equal "100.1". Differences: `actual`: "4.6" `expected`: "100.1" ── Failure ('test_search_ncbi_clinvar.R:34:3'): search_ncbi_clinvar correctly retrieves pathogenicity information ── Expected `result` to equal `list(c("Pathogenic", "No results"))`. Differences: `actual[[1]]`: "Uncertain significance" "No results" `expected[[1]]`: "Pathogenic" "No results" [ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ] Error: ! Test failures. Execution halted Flavor: r-devel-macos-arm64

Version: 0.1.0
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [5s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_extract_chip_id-10.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ── Expected `result` to equal "100.1". Differences: `actual`: "4.6" `expected`: "100.1" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64

Version: 0.1.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [1s/3s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_extract_chip_id-10.R Saving _problems/test_search_ncbi_clinvar-34.R [ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ── Expected `result` to equal "100.1". Differences: `actual`: "4.5" `expected`: "100.1" ── Failure ('test_search_ncbi_clinvar.R:34:3'): search_ncbi_clinvar correctly retrieves pathogenicity information ── Expected `result` to equal `list(c("Pathogenic", "No results"))`. Differences: `actual[[1]]`: "Uncertain significance" "No results" `expected[[1]]`: "Pathogenic" "No results" [ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ] Error: ! Test failures. Execution halted Flavor: r-release-macos-arm64

Version: 0.1.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [2s/5s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_extract_chip_id-10.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ── Expected `result` to equal "100.1". Differences: `actual`: "4.5" `expected`: "100.1" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution halted Flavor: r-release-macos-x86_64

Version: 0.1.0
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [5s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_extract_chip_id-10.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ── Expected `result` to equal "100.1". Differences: `actual`: "4.5" `expected`: "100.1" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution halted Flavor: r-release-windows-x86_64

Version: 0.1.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [1s/3s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_extract_chip_id-10.R Saving _problems/test_search_ncbi_clinvar-34.R [ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ── Expected `result` to equal "100.1". Differences: `actual`: "4.4" `expected`: "100.1" ── Failure ('test_search_ncbi_clinvar.R:34:3'): search_ncbi_clinvar correctly retrieves pathogenicity information ── Expected `result` to equal `list(c("Pathogenic", "No results"))`. Differences: `actual[[1]]`: "Uncertain significance" "No results" `expected[[1]]`: "Pathogenic" "No results" [ FAIL 2 | WARN 0 | SKIP 0 | PASS 62 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-macos-arm64

Version: 0.1.0
Check: tests
Result: ERROR Running ‘spelling.R’ [0s/0s] Running ‘testthat.R’ [2s/5s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_extract_chip_id-10.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ── Expected `result` to equal "100.1". Differences: `actual`: "4.4" `expected`: "100.1" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-macos-x86_64

Version: 0.1.0
Check: tests
Result: ERROR Running 'spelling.R' [0s] Running 'testthat.R' [6s] Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(ORscraper) > > test_check("ORscraper") Saving _problems/test_extract_chip_id-10.R [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_extract_chip_id.R:10:3'): Testing the extract_chip_id function ── Expected `result` to equal "100.1". Differences: `actual`: "4.4" `expected`: "100.1" [ FAIL 1 | WARN 0 | SKIP 0 | PASS 63 ] Error: ! Test failures. Execution halted Flavor: r-oldrel-windows-x86_64