Last updated on 2025-11-17 01:49:48 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 11.86 | 248.50 | 260.36 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.27 | 240.67 | 250.94 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 26.00 | 332.49 | 358.49 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.43 | 249.95 | 264.38 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.55 | 304.46 | 319.01 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 24.00 | 196.00 | 220.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 13.00 | 185.00 | 198.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 230.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [86s/150s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.452, system: 0.043, elapsed: 1.702 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.686, system: 0.127, elapsed: 14.235 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.014, elapsed: 0.390 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.940, system: 0.214, elapsed: 7.260 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.004, elapsed: 0.290 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.003, system: 0.432, elapsed: 24.699 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.540, system: 0.037, elapsed: 2.426 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.850, system: 0.350, elapsed: 15.469 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.023, elapsed: 0.321 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.390, system: 0.330, elapsed: 6.706 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.011, elapsed: 0.274 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.740, system: 0.793, elapsed: 26.111 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.766, system: 0.086, elapsed: 2.595 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.608, system: 0.097, elapsed: 24.070 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.012, elapsed: 0.569 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.901, system: 0.181, elapsed: 9.852 seconds]
Computing values for grid cells...
... done. [user: 0.188, system: 0.013, elapsed: 0.471 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.233, system: 0.253, elapsed: 1.778 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.559, system: 0.689, elapsed: 40.790 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.525, system: 0.033, elapsed: 2.904 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.720, system: 0.080, elapsed: 17.828 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.013, elapsed: 0.371 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.028, system: 0.208, elapsed: 7.405 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.003, elapsed: 0.247 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.891, system: 0.529, elapsed: 19.597 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.211, system: 0.890, elapsed: 49.532 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.513, system: 0.035, elapsed: 2.450 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.461, system: 0.062, elapsed: 14.939 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.015, elapsed: 0.306 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.765, system: 0.188, elapsed: 5.951 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.005, elapsed: 0.268 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.663, system: 0.330, elapsed: 24.800 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.604, system: 0.033, elapsed: 2.780 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.478, system: 0.069, elapsed: 15.828 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.012, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.782, system: 0.172, elapsed: 6.363 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.277 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.792, system: 0.317, elapsed: 26.531 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.028, elapsed: 2.632 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.555, system: 0.066, elapsed: 14.819 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.012, elapsed: 0.365 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.857, system: 0.173, elapsed: 5.957 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.007, elapsed: 0.280 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.108, system: 0.259, elapsed: 1.044 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.148, system: 0.571, elapsed: 26.158 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.741, system: 0.052, elapsed: 2.810 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.643, system: 0.201, elapsed: 17.755 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.015, elapsed: 0.333 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.885, system: 0.242, elapsed: 6.231 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.005, elapsed: 0.255 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.991, system: 0.559, elapsed: 18.192 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.300, system: 1.108, elapsed: 46.658 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64