Last updated on 2025-08-22 01:50:06 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.99 | 264.24 | 277.23 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.26 | 222.37 | 232.63 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 315.74 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 476.97 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 19.00 | 190.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.94 | 308.60 | 323.54 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.83 | 270.65 | 283.48 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 191.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 201.00 | 222.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 183.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 242.00 | 266.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [79s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.531, system: 0.045, elapsed: 2.828 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.136, system: 0.110, elapsed: 16.354 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.339 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.821, system: 0.199, elapsed: 6.617 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.006, elapsed: 0.328 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.391, system: 0.398, elapsed: 27.588 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.522, system: 0.037, elapsed: 2.800 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.145, system: 0.124, elapsed: 16.003 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.014, elapsed: 0.257 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.714, system: 0.200, elapsed: 6.637 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.003, elapsed: 0.305 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.264, system: 0.402, elapsed: 27.036 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.538, system: 0.051, elapsed: 3.019 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.956, system: 0.125, elapsed: 16.013 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.009, elapsed: 0.306 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.671, system: 0.162, elapsed: 5.600 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.236 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.129, system: 0.210, elapsed: 1.120 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.256, system: 0.582, elapsed: 27.391 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.423, system: 0.029, elapsed: 2.290 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.072, system: 0.069, elapsed: 15.090 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.010, elapsed: 0.268 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.685, system: 0.164, elapsed: 5.817 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.003, elapsed: 0.243 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.257, system: 0.440, elapsed: 17.568 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.431, system: 0.742, elapsed: 42.297 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.590, system: 0.051, elapsed: 2.637 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.055, system: 0.124, elapsed: 16.542 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.014, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.597, system: 0.196, elapsed: 6.242 seconds]
Computing values for grid cells...
... done. [user: 0.156, system: 0.004, elapsed: 0.240 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.112, system: 0.407, elapsed: 26.875 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.533, system: 0.043, elapsed: 2.285 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.392, system: 0.278, elapsed: 15.481 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.191, system: 0.016, elapsed: 0.345 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.938, system: 0.272, elapsed: 6.879 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.008, elapsed: 0.226 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.759, system: 0.651, elapsed: 26.172 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.720, system: 0.080, elapsed: 2.367 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.986, system: 0.088, elapsed: 13.784 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.010, elapsed: 0.298 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.558, system: 0.156, elapsed: 6.359 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.013, elapsed: 0.354 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.081, system: 0.238, elapsed: 1.261 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.336, system: 0.614, elapsed: 25.403 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.543, system: 0.033, elapsed: 2.866 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.981, system: 0.073, elapsed: 14.103 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.013, elapsed: 0.428 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.684, system: 0.185, elapsed: 6.382 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.006, elapsed: 0.327 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.350, system: 0.504, elapsed: 14.830 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.571, system: 0.842, elapsed: 40.158 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64