Last updated on 2025-12-30 02:48:53 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.06 | 244.27 | 258.33 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.53 | 205.61 | 216.14 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 25.00 | 289.70 | 314.70 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 27.00 | 350.69 | 377.69 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 193.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.19 | 283.55 | 298.74 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.00 | 255.84 | 270.84 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 163.00 | 173.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 197.00 | 218.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 292.00 | 302.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 236.00 | 262.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/121s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.645, system: 0.048, elapsed: 2.444 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.582, system: 0.140, elapsed: 12.389 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.020, elapsed: 0.288 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.392, system: 0.429, elapsed: 5.697 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.206 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.554, system: 0.664, elapsed: 21.722 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.652, system: 0.054, elapsed: 2.073 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.450, system: 0.123, elapsed: 11.299 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.012, elapsed: 0.222 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.538, system: 0.416, elapsed: 7.960 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.004, elapsed: 0.440 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.581, system: 0.639, elapsed: 22.837 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.598, system: 0.038, elapsed: 3.986 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.582, system: 0.091, elapsed: 20.707 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.204, system: 0.015, elapsed: 0.316 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.472, system: 0.408, elapsed: 6.799 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.005, elapsed: 0.292 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.235, system: 0.237, elapsed: 1.178 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.931, system: 0.832, elapsed: 34.554 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.583, system: 0.044, elapsed: 2.092 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.538, system: 0.101, elapsed: 12.066 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.210, system: 0.016, elapsed: 0.259 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.517, system: 0.422, elapsed: 6.162 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.005, elapsed: 0.262 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.729, system: 0.556, elapsed: 13.714 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.430, system: 1.166, elapsed: 35.358 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [88s/224s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.776, system: 0.079, elapsed: 2.874 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.843, system: 0.249, elapsed: 16.013 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.020, elapsed: 0.334 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.414, system: 0.545, elapsed: 7.061 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.011, elapsed: 0.224 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.990, system: 0.934, elapsed: 27.339 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.707, system: 0.074, elapsed: 2.098 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.826, system: 0.337, elapsed: 23.589 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.200, system: 0.016, elapsed: 0.652 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.347, system: 0.428, elapsed: 15.131 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.414 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.798, system: 0.890, elapsed: 43.102 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.599, system: 0.036, elapsed: 4.289 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.565, system: 0.074, elapsed: 25.259 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.014, elapsed: 0.597 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.363, system: 0.414, elapsed: 14.175 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.004, elapsed: 0.575 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.207, system: 0.312, elapsed: 2.733 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.743, system: 0.879, elapsed: 49.501 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.649, system: 0.038, elapsed: 5.496 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.561, system: 0.079, elapsed: 29.441 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.016, elapsed: 0.634 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.274, system: 0.430, elapsed: 12.590 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.412 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.652, system: 0.525, elapsed: 40.335 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.172, system: 1.115, elapsed: 91.095 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64