Last updated on 2026-10-01 02:49:53 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.4.1 | 2.26 | 176.95 | 179.21 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.4.1 | 2.01 | 101.21 | 103.22 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.4.1 | 125.86 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.4.1 | 131.70 | OK | |||
| r-devel-windows-x86_64 | 0.4.1 | 6.00 | 235.00 | 241.00 | OK | |
| r-patched-linux-x86_64 | 0.4.1 | 2.80 | 171.42 | 174.22 | OK | |
| r-release-linux-x86_64 | 0.4.1 | 2.49 | 169.56 | 172.05 | OK | |
| r-release-macos-arm64 | 0.4.1 | 1.00 | 152.00 | 153.00 | OK | |
| r-release-macos-x86_64 | 0.4.1 | 2.00 | 505.00 | 507.00 | OK | |
| r-release-windows-x86_64 | 0.4.1 | 6.00 | 221.00 | 227.00 | OK | |
| r-oldrel-macos-arm64 | 0.4.1 | OK | ||||
| r-oldrel-macos-x86_64 | 0.4.1 | 2.00 | 459.00 | 461.00 | OK | |
| r-oldrel-windows-x86_64 | 0.4.1 | 6.00 | 321.00 | 327.00 | OK |
Version: 0.4.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘BadCoordinateID.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘BadCoordinateID.Rmd’
--- re-building ‘BasicUsage.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘BasicUsage.Rmd’
--- re-building ‘Fields.Rmd’ using rmarkdown
Quitting from Fields.Rmd:179-188 [unnamed-chunk-12]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `if (inherits(fields, "logical") && fields == FALSE) ...`:
! missing value where TRUE/FALSE needed
---
Backtrace:
▆
1. └─ridigbio::idig_search_media(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Fields.Rmd' failed with diagnostics:
missing value where TRUE/FALSE needed
--- failed re-building ‘Fields.Rmd’
--- re-building ‘FindTissue.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘FindTissue.Rmd’
--- re-building ‘IDDataFlags.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘IDDataFlags.Rmd’
--- re-building ‘MediaAPIDemo.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘MediaAPIDemo.Rmd’
--- re-building ‘ModifiedDataID.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘ModifiedDataID.Rmd’
--- re-building ‘RecordAPIDemo.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
[WARNING] Div at RecordAPIDemo.knit.md line 200 column 1 unclosed at RecordAPIDemo.knit.md line 12580 column 1, closing implicitly.
--- finished re-building ‘RecordAPIDemo.Rmd’
--- re-building ‘ridigbio.Rmd’ using rmarkdown
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
--- finished re-building ‘ridigbio.Rmd’
SUMMARY: processing the following file failed:
‘Fields.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc