Last updated on 2026-03-27 02:51:54 CET.
| Package | ERROR | OK |
|---|---|---|
| algaeClassify | 2 | 12 |
Current CRAN status: ERROR: 2, OK: 12
Version: 2.0.5
Check: examples
Result: ERROR
Running examples in ‘algaeClassify-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: itis_search_df
> ### Title: Wrapper function for applying genus_search_itis and
> ### species_search_itis to a whole data.frame containing scientific names
> ### Aliases: itis_search_df
>
> ### ** Examples
>
> data(lakegeneva)
> #example dataset
>
> new.lakegeneva <- genus_species_extract(lakegeneva[1,],'phyto_name')
> new.lakegeneva$genus_species <- trimws(paste(new.lakegeneva$genus,
+ new.lakegeneva$species))
> #checking for genus-only name matches in ITIS, and extracting higher taxonomy
> #flagging names with imperfect or no matches
>
> lakegeneva.genus.itischeck <-
+ itis_search_df(new.lakegeneva,"genus_species")
Error in curl::curl_fetch_memory(x$url$url, handle = x$url$handle) :
Failure when receiving data from the peer [services.itis.gov]:
Recv failure: Connection reset by peer
Calls: itis_search_df ... <Anonymous> -> crul_fetch -> <Anonymous> -> raise_libcurl_error
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
genus_search_itis 1.458 0.07 5.434
Flavor: r-patched-linux-x86_64
Version: 2.0.5
Check: examples
Result: ERROR
Running examples in 'algaeClassify-Ex.R' failed
The error most likely occurred in:
> ### Name: itis_search_df
> ### Title: Wrapper function for applying genus_search_itis and
> ### species_search_itis to a whole data.frame containing scientific names
> ### Aliases: itis_search_df
>
> ### ** Examples
>
> data(lakegeneva)
> #example dataset
>
> new.lakegeneva <- genus_species_extract(lakegeneva[1,],'phyto_name')
> new.lakegeneva$genus_species <- trimws(paste(new.lakegeneva$genus,
+ new.lakegeneva$species))
> #checking for genus-only name matches in ITIS, and extracting higher taxonomy
> #flagging names with imperfect or no matches
>
> lakegeneva.genus.itischeck <-
+ itis_search_df(new.lakegeneva,"genus_species")
Error in curl::curl_fetch_memory(x$url$url, handle = x$url$handle) :
Failure when receiving data from the peer [services.itis.gov]:
Recv failure: Connection was reset
Calls: itis_search_df ... <Anonymous> -> crul_fetch -> <Anonymous> -> raise_libcurl_error
Execution halted
Flavor: r-oldrel-windows-x86_64