CauMedi: Cell Type-Specific Causal Mediation Models for Single-Cell Data

A causal mediation framework for cell type-specific single-cell data based on joint mediator multilevel models. The framework jointly models overdispersed counts and zero inflation for the mediators.

Version: 0.1.1
Imports: glmnet
Suggests: knitr, rmarkdown, testthat (≥ 3.0.0)
Published: 2026-08-04
DOI: 10.32614/CRAN.package.CauMedi (may not be active yet)
Author: Seungjun Ahn [aut], Donald Porchia [aut], Weijia Fu ORCID iD [cre, aut], Zhigang Li [ctb]
Maintainer: Weijia Fu <weijia.fu at mountsinai.org>
License: MIT + file LICENSE
NeedsCompilation: no
CRAN checks: CauMedi results

Documentation:

Reference manual: CauMedi.html , CauMedi.pdf
Vignettes: CauMedi (source, R code)

Downloads:

Package source: CauMedi_0.1.1.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): CauMedi_0.1.1.tgz, r-oldrel (arm64): CauMedi_0.1.1.tgz, r-release (x86_64): CauMedi_0.1.1.tgz, r-oldrel (x86_64): CauMedi_0.1.1.tgz

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