cleanepi: Clean and Standardize Epidemiological Data
Cleaning and standardizing tabular data package, tailored specifically for curating epidemiological data. It streamlines various data cleaning tasks that are typically expected when working with datasets in epidemiology. It returns the processed data in the same format, and generates a comprehensive report detailing the outcomes of each cleaning task.
| Version: | 1.1.0 |
| Depends: | R (≥ 4.0.0) |
| Imports: | checkmate, cli, dplyr, janitor, linelist (≥ 1.0.0), lubridate, magrittr, matchmaker, numberize, readr, rlang, tibble |
| Suggests: | htmlwidgets, kableExtra, knitr, lintr, markdown, naniar, reactable, rmarkdown, spelling, testthat (≥ 3.0.0) |
| Published: | 2025-03-04 |
| DOI: | 10.32614/CRAN.package.cleanepi |
| Author: | Karim Mané  [aut,
cre],
Thibaut Jombart [ctb] (Thibault contributed in development of
date_guess().),
Abdoelnaser Degoot
[aut],
Bankolé Ahadzie [aut],
Nuredin Mohammed [aut],
Bubacarr Bah
[aut],
Hugo Gruson [ctb,
rev],
Pratik R. Gupte
[rev],
James M. Azam
[rev],
Joshua W. Lambert
[rev],
Chris Hartgerink
[rev],
Andree Valle-Campos
[rev, ctb],
London School of Hygiene and Tropical Medicine, LSHTM
 [cph],
data.org [fnd] |
| Maintainer: | Karim Mané <karim.mane at lshtm.ac.uk> |
| BugReports: | https://github.com/epiverse-trace/cleanepi/issues |
| License: | MIT + file LICENSE |
| URL: | https://epiverse-trace.github.io/cleanepi/, https://github.com/epiverse-trace/cleanepi |
| NeedsCompilation: | no |
| Language: | en-US |
| Citation: | cleanepi citation info |
| Materials: | README NEWS |
| In views: | Epidemiology |
| CRAN checks: | cleanepi results |
Documentation:
| Reference manual: | cleanepi.pdf |
| Vignettes: |
Introduction to cleanepi (source, R code) Package Design vignette for {cleanepi} (source, R code) |
Downloads:
| Package source: | cleanepi_1.1.0.tar.gz |
| Windows binaries: | r-devel: cleanepi_1.0.2.zip, r-release: cleanepi_1.0.2.zip, r-oldrel: cleanepi_1.0.2.zip |
| macOS binaries: | r-devel (arm64): cleanepi_1.1.0.tgz, r-release (arm64): cleanepi_1.1.0.tgz, r-oldrel (arm64): cleanepi_1.0.2.tgz, r-devel (x86_64): cleanepi_1.1.0.tgz, r-release (x86_64): cleanepi_1.1.0.tgz, r-oldrel (x86_64): cleanepi_1.1.0.tgz |
| Old sources: | cleanepi archive |
Linking:
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