Fit species distribution models (SDMs) using the 'tidymodels' framework, which provides a standardised interface to define models and process their outputs. 'tidysdm' expands 'tidymodels' by providing methods for spatial objects, models and metrics specific to SDMs, as well as a number of specialised functions to process occurrences for contemporary and palaeo datasets. The full functionalities of the package are described in Leonardi et al. (2023) <doi:10.1101/2023.07.24.550358>.
| Version: | 1.0.0 |
| Depends: | tidymodels, spatialsample, R (≥ 3.5.0) |
| Imports: | DALEX, dials, dplyr, ggplot2, lubridate, magrittr, maxnet, methods, parsnip, patchwork, recipes, rsample, rlang (≥ 1.0.0), stats, stars, sf, terra, tibble, tune, workflows, workflowsets, yardstick |
| Suggests: | blockCV, data.table, DALEXtra, doParallel, earth, kernlab, knitr, overlapping, pastclim (≥ 2.0.0), ranger, rgbif, rmarkdown, spelling, stacks, testthat (≥ 3.0.0), tidyterra, vdiffr, xgboost, ggpattern, RhpcBLASctl |
| Published: | 2025-03-05 |
| DOI: | 10.32614/CRAN.package.tidysdm |
| Author: | Michela Leonardi [aut], Margherita Colucci [aut], Andrea Vittorio Pozzi [aut], Eleanor M.L. Scerri [aut], Ben Tupper [ctb], Andrea Manica [aut, cre] |
| Maintainer: | Andrea Manica <am315 at cam.ac.uk> |
| BugReports: | https://github.com/EvolEcolGroup/tidysdm/issues |
| License: | AGPL (≥ 3) |
| URL: | https://github.com/EvolEcolGroup/tidysdm, https://evolecolgroup.github.io/tidysdm/ |
| NeedsCompilation: | no |
| Language: | en-GB |
| Materials: | README NEWS |
| CRAN checks: | tidysdm results |
| Reference manual: | tidysdm.pdf |
| Vignettes: |
tidysdm overview (source, R code) Application with palaeodata (source, R code) Examples of additional tidymodels features (source, R code) Troubleshooting models that fail (source, R code) |
| Package source: | tidysdm_1.0.0.tar.gz |
| Windows binaries: | r-devel: tidysdm_0.9.5.zip, r-release: tidysdm_0.9.5.zip, r-oldrel: tidysdm_0.9.5.zip |
| macOS binaries: | r-devel (arm64): tidysdm_1.0.0.tgz, r-release (arm64): tidysdm_1.0.0.tgz, r-oldrel (arm64): tidysdm_1.0.0.tgz, r-devel (x86_64): tidysdm_1.0.0.tgz, r-release (x86_64): tidysdm_1.0.0.tgz, r-oldrel (x86_64): tidysdm_1.0.0.tgz |
| Old sources: | tidysdm archive |
Please use the canonical form https://CRAN.R-project.org/package=tidysdm to link to this page.